BLASTX nr result

ID: Glycyrrhiza23_contig00030273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030273
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [M...   187   1e-82
ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   191   1e-79
ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurini...   181   1e-62
ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]...   152   2e-43
ref|XP_002304326.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-41

>ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [Medicago truncatula]
           gi|355523340|gb|AET03794.1| DNA-(apurinic or
           apyrimidinic site) lyase [Medicago truncatula]
          Length = 613

 Score =  187 bits (475), Expect(2) = 1e-82
 Identities = 87/102 (85%), Positives = 93/102 (91%)
 Frame = -3

Query: 372 PNQFELNTDACDQDLAEPNDSSRKEEQSNVASLEWQRIQKLMQSSIPLCKGHKEPCIARV 193
           P Q E+N D C QDLAE N+SSRKEE+SNVAS EWQRIQKLMQ+SIPLCKGHKEPCIARV
Sbjct: 512 PGQDEINADVCGQDLAEINNSSRKEEKSNVASQEWQRIQKLMQNSIPLCKGHKEPCIARV 571

Query: 192 VRKQGPNFGRRFYVCARAEGPASNPEANCGYFKWATSKSRNK 67
           V+KQG NFGRRFY CARAEGPASNPEANCGYFKWATSKS+NK
Sbjct: 572 VKKQGANFGRRFYTCARAEGPASNPEANCGYFKWATSKSKNK 613



 Score =  145 bits (367), Expect(2) = 1e-82
 Identities = 77/104 (74%), Positives = 85/104 (81%)
 Frame = -1

Query: 695 CDSLPNQDSEVSILESNEFSIGSSQEVVSKSRSEYVKSITRQCNDSKKKARNSQWSQLSL 516
           CD  PNQDSE SIL+ NE S GSSQE VSKS S Y KSIT++CN+SKKKARNSQ SQLS+
Sbjct: 405 CDLFPNQDSEGSILKPNELSAGSSQESVSKSGSVYEKSITQKCNESKKKARNSQSSQLSI 464

Query: 515 RSFFQKSTNLGNGVNDSCTDDNSNNQAEPSQPNSQLLETPTVFD 384
           RSFFQKST+L NGV DSC    SNN+AEPSQPNSQLLET T+ D
Sbjct: 465 RSFFQKSTSLDNGVKDSCI-SYSNNEAEPSQPNSQLLETCTIID 507


>ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like
           [Glycine max]
          Length = 622

 Score =  191 bits (486), Expect(2) = 1e-79
 Identities = 87/102 (85%), Positives = 96/102 (94%)
 Frame = -3

Query: 372 PNQFELNTDACDQDLAEPNDSSRKEEQSNVASLEWQRIQKLMQSSIPLCKGHKEPCIARV 193
           P Q+EL+TD CD DLA PN SS KEE+SNVASLEWQRI++LMQ+SIP+CKGHKEPCIARV
Sbjct: 521 PKQYELDTDTCDPDLAGPNGSSTKEEKSNVASLEWQRIKQLMQNSIPICKGHKEPCIARV 580

Query: 192 VRKQGPNFGRRFYVCARAEGPASNPEANCGYFKWATSKSRNK 67
           V+KQGPNFGRRFYVCARAEGPASNPEANCGYFKWA+SKSRNK
Sbjct: 581 VKKQGPNFGRRFYVCARAEGPASNPEANCGYFKWASSKSRNK 622



 Score =  131 bits (329), Expect(2) = 1e-79
 Identities = 74/109 (67%), Positives = 81/109 (74%), Gaps = 7/109 (6%)
 Frame = -1

Query: 695 CDSLPNQDSEVS-ILESNEFSIGSSQEVVSKSRSEYVKSITRQCNDSKKKARNSQWSQLS 519
           C   P+QD EVS IL+ N+ S GSSQE VSKS SE  KS TRQCN S KKARN QWSQLS
Sbjct: 406 CHFPPSQDFEVSSILKPNKLSGGSSQESVSKSGSENKKSTTRQCNRSNKKARNGQWSQLS 465

Query: 518 LRSFFQKSTNLGNG------VNDSCTDDNSNNQAEPSQPNSQLLETPTV 390
           LRSFFQKSTNL  G      VNDSCTD ++NNQAEPSQP+ +L E PTV
Sbjct: 466 LRSFFQKSTNLDKGSSIKEVVNDSCTDYSNNNQAEPSQPSPRLQEIPTV 514


>ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site)
           lyase 2-like [Glycine max]
          Length = 566

 Score =  181 bits (460), Expect(2) = 1e-62
 Identities = 83/102 (81%), Positives = 93/102 (91%)
 Frame = -3

Query: 372 PNQFELNTDACDQDLAEPNDSSRKEEQSNVASLEWQRIQKLMQSSIPLCKGHKEPCIARV 193
           P ++ L+TD CDQDLA PN SS KEE SNVASLEWQRIQ+LMQ+SIP+CKG+KEPCIARV
Sbjct: 465 PKKYGLDTDTCDQDLAGPNGSSTKEEMSNVASLEWQRIQQLMQNSIPICKGYKEPCIARV 524

Query: 192 VRKQGPNFGRRFYVCARAEGPASNPEANCGYFKWATSKSRNK 67
           V+KQGPNFGRRFYVCA AEGPASN EANCGYFKWA+SKS+NK
Sbjct: 525 VKKQGPNFGRRFYVCAHAEGPASNLEANCGYFKWASSKSKNK 566



 Score = 84.7 bits (208), Expect(2) = 1e-62
 Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 5/61 (8%)
 Frame = -1

Query: 554 KKARNSQWSQLSLRSFFQKSTNLGNG-----VNDSCTDDNSNNQAEPSQPNSQLLETPTV 390
           +KA++SQWSQLSLRSFFQKS NL NG     VNDSCT D SNNQAEPSQP+ +L ETPTV
Sbjct: 400 EKAKSSQWSQLSLRSFFQKSANLDNGSSVKVVNDSCT-DYSNNQAEPSQPSPRLQETPTV 458

Query: 389 F 387
           F
Sbjct: 459 F 459


>ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]
           gi|223539047|gb|EEF40643.1| ap endonuclease, putative
           [Ricinus communis]
          Length = 586

 Score =  152 bits (383), Expect(2) = 2e-43
 Identities = 69/102 (67%), Positives = 83/102 (81%)
 Frame = -3

Query: 372 PNQFELNTDACDQDLAEPNDSSRKEEQSNVASLEWQRIQKLMQSSIPLCKGHKEPCIARV 193
           P    LN+ +  QD  E N+   ++E++NVA LEWQRIQ+LMQ+SIPLCKGHKEPC++R+
Sbjct: 485 PGHCGLNSSSGTQDQDEINNGPSEKEKNNVALLEWQRIQQLMQNSIPLCKGHKEPCVSRI 544

Query: 192 VRKQGPNFGRRFYVCARAEGPASNPEANCGYFKWATSKSRNK 67
           V+K GP  G RFYVCARAEGPASNPEANCGYFKWA+SKSR K
Sbjct: 545 VKKPGPTCGHRFYVCARAEGPASNPEANCGYFKWASSKSRQK 586



 Score = 50.4 bits (119), Expect(2) = 2e-43
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
 Frame = -1

Query: 689 SLPNQDSEVSILESNEFSIGSSQEVVSKS----RSEYVKSITRQCNDSKKKARNSQWSQL 522
           S   +DS+ +IL   +     S +  S S    +S ++ S+  +   +KKKAR SQ SQL
Sbjct: 378 SCATKDSDGAILRMEKHCKDFSDQTCSDSTIMLQSRHINSMHTE--GTKKKARKSQCSQL 435

Query: 521 SLRSFFQKSTNLGNGVNDSCTD------DNSNNQAEPSQPNSQ 411
           SLRSFFQ++ N  +G  ++  D      + SN+ + PS+  SQ
Sbjct: 436 SLRSFFQRTPNTRSGAENTALDISHSQENVSNSNSPPSETASQ 478


>ref|XP_002304326.1| predicted protein [Populus trichocarpa] gi|222841758|gb|EEE79305.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  145 bits (365), Expect(2) = 4e-41
 Identities = 65/102 (63%), Positives = 81/102 (79%)
 Frame = -3

Query: 372 PNQFELNTDACDQDLAEPNDSSRKEEQSNVASLEWQRIQKLMQSSIPLCKGHKEPCIARV 193
           P   +LN  A  Q   + ND S + E++NVA LEWQRIQ+LM++SIP+CKGHKEPC+AR+
Sbjct: 516 PRHCQLNPSAGSQYQDKGNDGSLEREKNNVALLEWQRIQQLMRNSIPVCKGHKEPCVARI 575

Query: 192 VRKQGPNFGRRFYVCARAEGPASNPEANCGYFKWATSKSRNK 67
           V+K G  FG RF+VC+RAEGP SNPEANCGYFKWA+SKS+ K
Sbjct: 576 VKKPGRTFGHRFFVCSRAEGPVSNPEANCGYFKWASSKSQRK 617



 Score = 49.3 bits (116), Expect(2) = 4e-41
 Identities = 29/59 (49%), Positives = 40/59 (67%)
 Frame = -1

Query: 602 RSEYVKSITRQCNDSKKKARNSQWSQLSLRSFFQKSTNLGNGVNDSCTDDNSNNQAEPS 426
           +S++ K +  +   +KKK R S+ SQLSLRSFFQKS NL  G  +S T + S +QAEP+
Sbjct: 443 QSQHTKFVPAE--GTKKKPRKSRCSQLSLRSFFQKSPNLSTGAENSST-NASPSQAEPN 498


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