BLASTX nr result

ID: Glycyrrhiza23_contig00030252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030252
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610502.1| Integrator complex subunit-like protein [Med...   222   2e-56
ref|XP_002527040.1| conserved hypothetical protein [Ricinus comm...   192   2e-47
ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46
ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo...   184   5e-45
ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homo...   175   3e-42

>ref|XP_003610502.1| Integrator complex subunit-like protein [Medicago truncatula]
           gi|355511557|gb|AES92699.1| Integrator complex
           subunit-like protein [Medicago truncatula]
          Length = 560

 Score =  222 bits (566), Expect = 2e-56
 Identities = 106/121 (87%), Positives = 112/121 (92%)
 Frame = -3

Query: 363 EIHLCVKIVREEFHLCLKIGRDFIRLLQDLVHVPEFKAIWKDLVLNPSRFNTLGFVGVSQ 184
           E+H CVKIVREEFHLC+KIGRDFIRLLQDLVHVPEFK+IWKDL+LNPS FNTLGF GVSQ
Sbjct: 195 EVHFCVKIVREEFHLCMKIGRDFIRLLQDLVHVPEFKSIWKDLMLNPSSFNTLGFSGVSQ 254

Query: 183 IYCTRTSSRYALLRITPEMETQLRFLLTHVKFGHQKRHQMWFARKFLGEPDKETAIVDIV 4
           IY TRTSSRYALLRITP METQLRFLLTHVK G+QKRH MWFARKFL EPDKET +VDIV
Sbjct: 255 IYLTRTSSRYALLRITPAMETQLRFLLTHVKLGNQKRHLMWFARKFLNEPDKETVVVDIV 314

Query: 3   R 1
           R
Sbjct: 315 R 315


>ref|XP_002527040.1| conserved hypothetical protein [Ricinus communis]
           gi|223533602|gb|EEF35340.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 982

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/121 (75%), Positives = 102/121 (84%)
 Frame = -3

Query: 363 EIHLCVKIVREEFHLCLKIGRDFIRLLQDLVHVPEFKAIWKDLVLNPSRFNTLGFVGVSQ 184
           EI  CVK++RE+FHLC+KIGRD IRLLQDLVHVP F+AIWKDLVLNP  F T GF  +SQ
Sbjct: 156 EIEFCVKMLREQFHLCMKIGRDLIRLLQDLVHVPAFRAIWKDLVLNPGEFRTPGFSDISQ 215

Query: 183 IYCTRTSSRYALLRITPEMETQLRFLLTHVKFGHQKRHQMWFARKFLGEPDKETAIVDIV 4
           +YC RTSS Y LLRITPEMETQLRFLL HVKFG QKRHQ WF +KFL +P++ET IVDIV
Sbjct: 216 LYCCRTSSCYFLLRITPEMETQLRFLLMHVKFGSQKRHQTWFFKKFLFKPERETVIVDIV 275

Query: 3   R 1
           R
Sbjct: 276 R 276


>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score =  187 bits (476), Expect = 6e-46
 Identities = 87/121 (71%), Positives = 105/121 (86%)
 Frame = -3

Query: 363 EIHLCVKIVREEFHLCLKIGRDFIRLLQDLVHVPEFKAIWKDLVLNPSRFNTLGFVGVSQ 184
           EI  CVK++RE+F+LC+KIGRD IRLL+DLVHVPEF+AIW DLV NPS F T GF  +SQ
Sbjct: 196 EIEFCVKMLREQFNLCMKIGRDLIRLLRDLVHVPEFRAIWNDLVSNPSEFRTEGFSDISQ 255

Query: 183 IYCTRTSSRYALLRITPEMETQLRFLLTHVKFGHQKRHQMWFARKFLGEPDKETAIVDIV 4
           +YC+RTSSRY LLRITPEMETQLRFLL HVKFG+QKR+Q+WFA+KFL   ++ET +VDI+
Sbjct: 256 LYCSRTSSRYFLLRITPEMETQLRFLLMHVKFGNQKRYQVWFAKKFLFGQERETLVVDII 315

Query: 3   R 1
           R
Sbjct: 316 R 316


>ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera]
          Length = 928

 Score =  184 bits (468), Expect = 5e-45
 Identities = 88/121 (72%), Positives = 99/121 (81%)
 Frame = -3

Query: 363 EIHLCVKIVREEFHLCLKIGRDFIRLLQDLVHVPEFKAIWKDLVLNPSRFNTLGFVGVSQ 184
           EI  C++++RE+FHLCLKIGRD IRLLQDLVHVPEF+A+WKDLVLNP  F   GF  VSQ
Sbjct: 181 EIEFCIRVLREQFHLCLKIGRDLIRLLQDLVHVPEFRAVWKDLVLNPGEFKIQGFEDVSQ 240

Query: 183 IYCTRTSSRYALLRITPEMETQLRFLLTHVKFGHQKRHQMWFARKFLGEPDKETAIVDIV 4
           +Y  RTSSRY LLRITPEME+QLRFLLTHVK G QKRHQ WF RKFL   ++ET I DIV
Sbjct: 241 LYRERTSSRYFLLRITPEMESQLRFLLTHVKLGSQKRHQAWFMRKFLCGSERETLICDIV 300

Query: 3   R 1
           R
Sbjct: 301 R 301


>ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homolog [Cucumis sativus]
          Length = 588

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/121 (66%), Positives = 99/121 (81%)
 Frame = -3

Query: 363 EIHLCVKIVREEFHLCLKIGRDFIRLLQDLVHVPEFKAIWKDLVLNPSRFNTLGFVGVSQ 184
           EI  C+K++RE+FH CLKIGRDFIRLLQDLV+VPEF+ +WKDL++NPS F + GF  +S 
Sbjct: 195 EIAFCIKVIREQFHFCLKIGRDFIRLLQDLVYVPEFRDVWKDLLINPSNFRSPGFSDISN 254

Query: 183 IYCTRTSSRYALLRITPEMETQLRFLLTHVKFGHQKRHQMWFARKFLGEPDKETAIVDIV 4
            Y TRTSSRY LLRI+PEME QLRFL+T+VK G Q R+Q+WFA+KFL  P+ ET I DIV
Sbjct: 255 FYHTRTSSRYFLLRISPEMEAQLRFLMTNVKLGSQNRYQIWFAKKFLHGPESETIISDIV 314

Query: 3   R 1
           R
Sbjct: 315 R 315


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