BLASTX nr result

ID: Glycyrrhiza23_contig00030240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030240
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554674.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional...    79   4e-13
ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus c...    75   5e-12
ref|XP_003520825.1| PREDICTED: bifunctional 3-dehydroquinate deh...    74   9e-12
ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydr...    74   9e-12
gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrog...    74   2e-11

>ref|XP_003554674.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
           dehydratase/shikimate dehydrogenase, chloroplastic-like
           [Glycine max]
          Length = 524

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/78 (57%), Positives = 52/78 (66%)
 Frame = +1

Query: 43  SNEVWNGCSVVVCAPLXXXXXXXXXXPVEVERIVSGMYQAKAQGADVVEVRLDLITNFQP 222
           SN+ W   SV+VCAP+           V VE+I + MYQAKA+ AD+VEVRLD ITNF P
Sbjct: 3   SNQDWKH-SVMVCAPITTQQS------VSVEQIANDMYQAKAEDADIVEVRLDCITNFHP 55

Query: 223 LPHLHTILTNKPLPVLIV 276
              L TIL NKPLPVLIV
Sbjct: 56  XHELKTILQNKPLPVLIV 73


>ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223548259|gb|EEF49750.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 519

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/71 (57%), Positives = 46/71 (64%)
 Frame = +1

Query: 67  SVVVCAPLXXXXXXXXXXPVEVERIVSGMYQAKAQGADVVEVRLDLITNFQPLPHLHTIL 246
           SV+VC PL             VE+++S MY AK QGADVVEVRLD I NFQP   L  IL
Sbjct: 10  SVMVCTPLMAQ---------SVEQMISDMYNAKTQGADVVEVRLDYIDNFQPPQDLQAIL 60

Query: 247 TNKPLPVLIVY 279
            NKPLPV+IVY
Sbjct: 61  RNKPLPVIIVY 71


>ref|XP_003520825.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
           dehydrogenase, chloroplastic-like [Glycine max]
          Length = 524

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/78 (55%), Positives = 52/78 (66%)
 Frame = +1

Query: 43  SNEVWNGCSVVVCAPLXXXXXXXXXXPVEVERIVSGMYQAKAQGADVVEVRLDLITNFQP 222
           SN+VW   SV+VCA +           V  E+IV+GM+QAKA+GAD+VE+RLD ITNF  
Sbjct: 3   SNQVWKH-SVMVCAAITTHQY------VSAEQIVNGMHQAKAEGADIVELRLDCITNFHS 55

Query: 223 LPHLHTILTNKPLPVLIV 276
              L  IL NKPLPVLIV
Sbjct: 56  HHDLKIILQNKPLPVLIV 73


>ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222838117|gb|EEE76482.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 518

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/71 (57%), Positives = 48/71 (67%)
 Frame = +1

Query: 67  SVVVCAPLXXXXXXXXXXPVEVERIVSGMYQAKAQGADVVEVRLDLITNFQPLPHLHTIL 246
           SV+VCAPL             VE++V  M+ AKAQGADVVEVRLD I+ FQP   L TI+
Sbjct: 10  SVMVCAPLMAQ---------SVEQMVIDMHSAKAQGADVVEVRLDCISKFQPRQDLETII 60

Query: 247 TNKPLPVLIVY 279
            NKPLPV+IVY
Sbjct: 61  RNKPLPVIIVY 71


>gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2
           [Nicotiana tabacum]
          Length = 521

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/71 (56%), Positives = 46/71 (64%)
 Frame = +1

Query: 67  SVVVCAPLXXXXXXXXXXPVEVERIVSGMYQAKAQGADVVEVRLDLITNFQPLPHLHTIL 246
           S +VCAPL             VE++V GM QAKAQGAD+VE+RLD I NFQP   L  +L
Sbjct: 10  SAMVCAPLMAP---------SVEQLVHGMLQAKAQGADLVEIRLDGINNFQPQKDLQVLL 60

Query: 247 TNKPLPVLIVY 279
            N PLPVLIVY
Sbjct: 61  NNNPLPVLIVY 71


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