BLASTX nr result
ID: Glycyrrhiza23_contig00030235
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00030235 (255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003543596.1| PREDICTED: WD-40 repeat-containing protein M... 164 5e-39 ref|XP_002527406.1| WD-repeat protein, putative [Ricinus communi... 162 4e-38 gb|AFK45971.1| unknown [Medicago truncatula] 160 1e-37 ref|XP_003597606.1| WD-40 repeat-containing protein MSI4 [Medica... 160 1e-37 ref|XP_002327543.1| nucleosome/chromatin assembly factor group [... 159 2e-37 >ref|XP_003543596.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max] Length = 453 Score = 164 bits (416), Expect = 5e-39 Identities = 76/84 (90%), Positives = 80/84 (95%) Frame = -2 Query: 254 DTVEDVQFCPSSAQEFCSVGDDSCLMLWDARVGSAPVVKVEKAHDGDLHCVDWSPHDINF 75 DTVEDVQFCPSSA EFCSVGDDS L+LWDARVGSAPVVKV+KAH+GDLHCVDWSPHDINF Sbjct: 237 DTVEDVQFCPSSALEFCSVGDDSRLILWDARVGSAPVVKVDKAHNGDLHCVDWSPHDINF 296 Query: 74 ILTGSADNTVHMFDRRKLNSSGVG 3 ILTGSADNT+HMFDRR L SSGVG Sbjct: 297 ILTGSADNTIHMFDRRNLTSSGVG 320 >ref|XP_002527406.1| WD-repeat protein, putative [Ricinus communis] gi|223533216|gb|EEF34972.1| WD-repeat protein, putative [Ricinus communis] Length = 466 Score = 162 bits (409), Expect = 4e-38 Identities = 71/84 (84%), Positives = 78/84 (92%) Frame = -2 Query: 254 DTVEDVQFCPSSAQEFCSVGDDSCLMLWDARVGSAPVVKVEKAHDGDLHCVDWSPHDINF 75 DTVEDVQFCPSSA EFCSVGDDSCL+LWDAR GS+PVVKVEKAH+ DLHCVDW+PHD+NF Sbjct: 248 DTVEDVQFCPSSAHEFCSVGDDSCLILWDARTGSSPVVKVEKAHNSDLHCVDWNPHDVNF 307 Query: 74 ILTGSADNTVHMFDRRKLNSSGVG 3 ILTGSADNT+HMFDRR L S G+G Sbjct: 308 ILTGSADNTIHMFDRRSLTSGGLG 331 >gb|AFK45971.1| unknown [Medicago truncatula] Length = 341 Score = 160 bits (405), Expect = 1e-37 Identities = 73/82 (89%), Positives = 77/82 (93%) Frame = -2 Query: 254 DTVEDVQFCPSSAQEFCSVGDDSCLMLWDARVGSAPVVKVEKAHDGDLHCVDWSPHDINF 75 DTVEDVQFCPSSAQEFCSVGDDSCL+LWDARVGS P VKVEKAHDGD+HCVDW+ HDINF Sbjct: 248 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARVGSFPAVKVEKAHDGDVHCVDWNTHDINF 307 Query: 74 ILTGSADNTVHMFDRRKLNSSG 9 ILTGSADNTV MFDRRKLN+ G Sbjct: 308 ILTGSADNTVRMFDRRKLNNRG 329 >ref|XP_003597606.1| WD-40 repeat-containing protein MSI4 [Medicago truncatula] gi|124360382|gb|ABN08395.1| WD40-like [Medicago truncatula] gi|355486654|gb|AES67857.1| WD-40 repeat-containing protein MSI4 [Medicago truncatula] Length = 479 Score = 160 bits (405), Expect = 1e-37 Identities = 73/82 (89%), Positives = 77/82 (93%) Frame = -2 Query: 254 DTVEDVQFCPSSAQEFCSVGDDSCLMLWDARVGSAPVVKVEKAHDGDLHCVDWSPHDINF 75 DTVEDVQFCPSSAQEFCSVGDDSCL+LWDARVGS P VKVEKAHDGD+HCVDW+ HDINF Sbjct: 248 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARVGSFPAVKVEKAHDGDVHCVDWNTHDINF 307 Query: 74 ILTGSADNTVHMFDRRKLNSSG 9 ILTGSADNTV MFDRRKLN+ G Sbjct: 308 ILTGSADNTVRMFDRRKLNNRG 329 >ref|XP_002327543.1| nucleosome/chromatin assembly factor group [Populus trichocarpa] gi|222836097|gb|EEE74518.1| nucleosome/chromatin assembly factor group [Populus trichocarpa] Length = 465 Score = 159 bits (402), Expect = 2e-37 Identities = 71/84 (84%), Positives = 76/84 (90%) Frame = -2 Query: 254 DTVEDVQFCPSSAQEFCSVGDDSCLMLWDARVGSAPVVKVEKAHDGDLHCVDWSPHDINF 75 DTVEDVQFCPSSAQEFCSVGDDSCL+LWDAR G PVVKVEKAH+ DLHCVDW+PHD+N Sbjct: 248 DTVEDVQFCPSSAQEFCSVGDDSCLVLWDARAGCTPVVKVEKAHNADLHCVDWNPHDVNL 307 Query: 74 ILTGSADNTVHMFDRRKLNSSGVG 3 ILTGSADN+VHMFDRR LN GVG Sbjct: 308 ILTGSADNSVHMFDRRNLNLGGVG 331