BLASTX nr result

ID: Glycyrrhiza23_contig00030228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030228
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67886.1| hypothetical protein VITISV_042574 [Vitis vinifera]   127   9e-28
emb|CAN79446.1| hypothetical protein VITISV_037463 [Vitis vinifera]   106   2e-21
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   105   3e-21
emb|CAN78839.1| hypothetical protein VITISV_036971 [Vitis vinifera]    99   3e-19
emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]    99   4e-19

>emb|CAN67886.1| hypothetical protein VITISV_042574 [Vitis vinifera]
          Length = 439

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/86 (73%), Positives = 70/86 (81%), Gaps = 2/86 (2%)
 Frame = -2

Query: 253 VHVERRIRRAPNYLQDYESGEGLSEDKD--NFAMFTSHDDPSSFEEAERDEKWRTAMDLE 80
           +  E RIRRAP YLQDY +GEGLSE+ D  N AMF SH+DP SFEEA+RD KW  AMDLE
Sbjct: 24  IQAETRIRRAPPYLQDYVTGEGLSENADVNNLAMFISHEDPGSFEEAKRDVKWIRAMDLE 83

Query: 79  IEAIKKNETWQLTTLPKGAKKIGVKW 2
           IEAI+KN+TWQLTTL  GAKKIGVKW
Sbjct: 84  IEAIEKNKTWQLTTLLNGAKKIGVKW 109


>emb|CAN79446.1| hypothetical protein VITISV_037463 [Vitis vinifera]
          Length = 1120

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/71 (74%), Positives = 57/71 (80%), Gaps = 2/71 (2%)
 Frame = -2

Query: 208 DYESGEGLSEDKD--NFAMFTSHDDPSSFEEAERDEKWRTAMDLEIEAIKKNETWQLTTL 35
           DY  GEGLS + D  N  MF SH+DP SFEEA+RD KW  AMDLEIEAI+KNETWQLTTL
Sbjct: 661 DYVMGEGLSRNADVNNLEMFISHEDPGSFEEAKRDVKWIRAMDLEIEAIEKNETWQLTTL 720

Query: 34  PKGAKKIGVKW 2
            KGAKKIGVKW
Sbjct: 721 LKGAKKIGVKW 731


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/84 (63%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
 Frame = -2

Query: 244 ERRIRRAPNYLQDYESGEGLSEDKD---NFAMFTSHDDPSSFEEAERDEKWRTAMDLEIE 74
           E R RR P ++Q Y SGEGLSE++    N A+FT  DDPSSFEEA    +WR AM  EIE
Sbjct: 638 EERNRRQPIWMQGYVSGEGLSEEEQELHNLAVFTPSDDPSSFEEAVVHSRWREAMRAEIE 697

Query: 73  AIKKNETWQLTTLPKGAKKIGVKW 2
           AI+ N+TWQLT+LPKG KKIGVKW
Sbjct: 698 AIETNDTWQLTSLPKGVKKIGVKW 721


>emb|CAN78839.1| hypothetical protein VITISV_036971 [Vitis vinifera]
          Length = 272

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/83 (59%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
 Frame = -2

Query: 244 ERRIRRAPNYLQDYESGEGLSEDKD--NFAMFTSHDDPSSFEEAERDEKWRTAMDLEIEA 71
           E R+RR P +++DYE GEGLSE++D  N A+F S  DP  FEEA +  KWR AMD EI++
Sbjct: 108 EGRVRRPPVWMRDYEMGEGLSEEEDETNLALFAS-GDPFYFEEAVKSAKWRAAMDSEIKS 166

Query: 70  IKKNETWQLTTLPKGAKKIGVKW 2
           I+KN+TW L  LP GAKK+GVKW
Sbjct: 167 IEKNDTWVLIDLPVGAKKVGVKW 189


>emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]
          Length = 1226

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
 Frame = -2

Query: 238 RIRRAPNYLQDYESGEGLSEDKDN--FAMFTSHDDPSSFEEAERDEKWRTAMDLEIEAIK 65
           R RR P +  DYE+GEG+SE++     AMF + D P  FEEA + EKWRT MD+E+EAIK
Sbjct: 696 RNRRPPVWTSDYETGEGISEEEHEVQLAMFAAAD-PIYFEEAVKSEKWRTTMDVEMEAIK 754

Query: 64  KNETWQLTTLPKGAKKIGVKW 2
           KN+TW+LT LPKG K IGVKW
Sbjct: 755 KNDTWELTDLPKGGKTIGVKW 775


Top