BLASTX nr result

ID: Glycyrrhiza23_contig00030227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030227
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540498.1| PREDICTED: uncharacterized protein LOC100812...   114   1e-23
ref|XP_003541816.1| PREDICTED: uncharacterized protein LOC100793...   112   3e-23
ref|XP_003596313.1| DNA polymerase delta subunit [Medicago trunc...   103   1e-20
emb|CBI20169.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250...    94   1e-17

>ref|XP_003540498.1| PREDICTED: uncharacterized protein LOC100812372 [Glycine max]
          Length = 518

 Score =  114 bits (284), Expect = 1e-23
 Identities = 65/103 (63%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
 Frame = +2

Query: 2   DSVKNATPGSPKRRKVMKTRIDXXXXXXXXXXXXXXXXXAKKADSVTAKKADSNGSTNAF 181
           DSV NA P SPKRRKVMKTRID                  KK D VT KK+DSN ST A 
Sbjct: 417 DSVNNAPPCSPKRRKVMKTRIDERGREVTEVVWDGEETEEKKPDKVTTKKSDSNASTKAI 476

Query: 182 NSAPAIKKPPAT----AGKGGSKKLANSKDPKQGNILSFFKRV 298
           NSAPA KKPPA     +GKGG KK  NSKDPKQGNILSFFKRV
Sbjct: 477 NSAPATKKPPANSNAISGKGG-KKAGNSKDPKQGNILSFFKRV 518


>ref|XP_003541816.1| PREDICTED: uncharacterized protein LOC100793247 [Glycine max]
          Length = 497

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/102 (60%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
 Frame = +2

Query: 5   SVKNATPGSPKRRKVMKTRIDXXXXXXXXXXXXXXXXXAKKADSVTAKKADSNGSTNAFN 184
           SV N  P SPKRRKVMKTRID                  KK D VT KK+DSN ST A +
Sbjct: 396 SVNNPPPCSPKRRKVMKTRIDERGREVTEVVWEGEETEEKKPDKVTTKKSDSNASTKAID 455

Query: 185 SAPAIKKPPATA----GKGGSKKLANSKDPKQGNILSFFKRV 298
           SAPA KKPPA +    GKGG KK  NSKDPKQGNILSFFKRV
Sbjct: 456 SAPATKKPPANSNAISGKGGKKKAGNSKDPKQGNILSFFKRV 497


>ref|XP_003596313.1| DNA polymerase delta subunit [Medicago truncatula]
           gi|355485361|gb|AES66564.1| DNA polymerase delta subunit
           [Medicago truncatula]
          Length = 527

 Score =  103 bits (258), Expect = 1e-20
 Identities = 60/107 (56%), Positives = 65/107 (60%), Gaps = 9/107 (8%)
 Frame = +2

Query: 2   DSVKNATPGSPKRRKVMKTRIDXXXXXXXXXXXXXXXXXAKKADSVTAKKADS------N 163
           DS K  +PGSPKRRKVMKTRID                  KK D  T KKAD+      N
Sbjct: 419 DSAKKVSPGSPKRRKVMKTRIDERGREVTEVVWEGEETEPKKDDKDTTKKADTVAKKADN 478

Query: 164 GSTNAFNSAPAIKKPPATA---GKGGSKKLANSKDPKQGNILSFFKR 295
            ST A N APA KKPPAT+   G+GGSKK  N KDPKQGNILSFFK+
Sbjct: 479 ISTKAVNGAPATKKPPATSNTTGRGGSKKAGNIKDPKQGNILSFFKK 525


>emb|CBI20169.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 56/107 (52%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
 Frame = +2

Query: 2   DSVKNATPGSPKRRKVMKTRIDXXXXXXXXXXXXXXXXXAKKADSVTAKKADSNGSTNAF 181
           D V +A P SPKRRKVMKTRID                  KKADS   KK++++  TNA 
Sbjct: 372 DKVTDAAPNSPKRRKVMKTRIDERGREVTEVVWEGEAE-TKKADSNETKKSENSIVTNAA 430

Query: 182 NSAPAIKKPPATA--------GKGGSKKLANSKDPKQGNILSFFKRV 298
           N AP  KK PA          GK GSKK  NSKDPKQGNI+SFFKRV
Sbjct: 431 NRAPPAKKSPAVGNTAPSNVTGKAGSKKAGNSKDPKQGNIMSFFKRV 477


>ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250468 [Vitis vinifera]
          Length = 524

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 56/107 (52%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
 Frame = +2

Query: 2   DSVKNATPGSPKRRKVMKTRIDXXXXXXXXXXXXXXXXXAKKADSVTAKKADSNGSTNAF 181
           D V +A P SPKRRKVMKTRID                  KKADS   KK++++  TNA 
Sbjct: 419 DKVTDAAPNSPKRRKVMKTRIDERGREVTEVVWEGEAE-TKKADSNETKKSENSIVTNAA 477

Query: 182 NSAPAIKKPPATA--------GKGGSKKLANSKDPKQGNILSFFKRV 298
           N AP  KK PA          GK GSKK  NSKDPKQGNI+SFFKRV
Sbjct: 478 NRAPPAKKSPAVGNTAPSNVTGKAGSKKAGNSKDPKQGNIMSFFKRV 524


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