BLASTX nr result

ID: Glycyrrhiza23_contig00030213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030213
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606725.1| hypothetical protein MTR_4g064830 [Medicago ...   110   1e-22
ref|XP_002314161.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
gb|AFK48462.1| unknown [Lotus japonicus]                               74   1e-11
ref|XP_002270855.1| PREDICTED: uncharacterized protein LOC100244...    74   1e-11
ref|XP_002299854.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_003606725.1| hypothetical protein MTR_4g064830 [Medicago truncatula]
           gi|355507780|gb|AES88922.1| hypothetical protein
           MTR_4g064830 [Medicago truncatula]
          Length = 478

 Score =  110 bits (275), Expect = 1e-22
 Identities = 65/137 (47%), Positives = 82/137 (59%)
 Frame = -1

Query: 413 EEEAEYLGAPMYESEKAPEAFKENARQQQPRGSPVFPVKHVVSSNDKPGMEQNREKTLNR 234
           EE+AEY GAPMYESE APE +KEN RQ   R SP  P  HV+S+N+K G+EQ REKTL+R
Sbjct: 173 EEDAEYHGAPMYESEMAPEGYKENVRQHS-RMSPRSPQTHVLSNNEKLGLEQAREKTLSR 231

Query: 233 SLSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKTVTKTIAEKNMTPTHAEGS 54
           SLS++                                 P+  +TK IAE+NM+P +AEGS
Sbjct: 232 SLSRK-----------------TTHPAATAATSTTLSGPSNIITKPIAEENMSPAYAEGS 274

Query: 53  EAPHSVTSKMQGLTVSK 3
           E  H +TSK+ GL+VSK
Sbjct: 275 ETAHYITSKVHGLSVSK 291


>ref|XP_002314161.1| predicted protein [Populus trichocarpa] gi|222850569|gb|EEE88116.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 53/142 (37%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
 Frame = -1

Query: 413 EEEAEYLGAPMYESEKAPEAFKENARQQQPRGSPVFPVKHVVSSN------DKPGMEQNR 252
           EE+ EYLGAPMYESE APE +KE AR Q PR  PV P KHV+ S+      DKP  E   
Sbjct: 110 EEDPEYLGAPMYESEMAPEGYKEAAR-QHPRAVPVIPEKHVLPSSVTCAAEDKPVTETVN 168

Query: 251 EKTLNRSLSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKTVTKTIAEKNMTP 72
            K  N + S                                     KT+++ +AEK + P
Sbjct: 169 GKQENENFS-------------------------------------KTLSEIMAEK-LAP 190

Query: 71  THAEGSEAPHSVTSKMQGLTVS 6
            +A  S+A H++TSK+Q L +S
Sbjct: 191 AYATVSDATHAITSKIQSLEIS 212


>gb|AFK48462.1| unknown [Lotus japonicus]
          Length = 433

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 51/136 (37%), Positives = 67/136 (49%)
 Frame = -1

Query: 413 EEEAEYLGAPMYESEKAPEAFKENARQQQPRGSPVFPVKHVVSSNDKPGMEQNREKTLNR 234
           EE+AEYLGAP+YESE APE +KENAR Q PR +PV   K V+ +  K GMEQ+R+   + 
Sbjct: 112 EEDAEYLGAPIYESELAPEDYKENAR-QHPRANPVISEKRVLRNAIKSGMEQDRDMLNSP 170

Query: 233 SLSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKTVTKTIAEKNMTPTHAEGS 54
           + S                                    N T+T+ IAEK +TP  A+G 
Sbjct: 171 ATSS---------------------TTPQPATTTTHGGSNMTMTEKIAEK-LTPAFAKGP 208

Query: 53  EAPHSVTSKMQGLTVS 6
           +  HS +S     T S
Sbjct: 209 DVAHSTSSNAVSRTPS 224


>ref|XP_002270855.1| PREDICTED: uncharacterized protein LOC100244777 [Vitis vinifera]
           gi|147765297|emb|CAN62428.1| hypothetical protein
           VITISV_034842 [Vitis vinifera]
           gi|297734850|emb|CBI17084.3| unnamed protein product
           [Vitis vinifera]
          Length = 394

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/137 (36%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
 Frame = -1

Query: 413 EEEAEYLGAPMYESEKAPEAFKENARQQQPRGSPVFPVKHVVSSNDK-PGMEQNREKTLN 237
           EE+ EYLGAPMYESE APE +KE AR Q PR  PV P  HV+ SN +    +Q +E T  
Sbjct: 101 EEDPEYLGAPMYESELAPEGYKETAR-QHPRAIPVIPESHVLPSNARNEANDQPKEST-- 157

Query: 236 RSLSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKTVTKTIAEKNMTPTHAEG 57
                                                    KT+T+T+ EK + P +A  
Sbjct: 158 -----------------------------------PIPNATKTITETVTEK-LAPAYATV 181

Query: 56  SEAPHSVTSKMQGLTVS 6
           +EA  ++ SK+QGLTV+
Sbjct: 182 AEATQTIASKIQGLTVA 198


>ref|XP_002299854.1| predicted protein [Populus trichocarpa] gi|222847112|gb|EEE84659.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 47/136 (34%), Positives = 63/136 (46%)
 Frame = -1

Query: 413 EEEAEYLGAPMYESEKAPEAFKENARQQQPRGSPVFPVKHVVSSNDKPGMEQNREKTLNR 234
           EE+ EYLGAPMYESE APE +KE AR Q PR  PV    H++ S++    E    K +  
Sbjct: 110 EEDPEYLGAPMYESEMAPEGYKETAR-QHPRAVPVISETHLLPSSETCAAE---VKPITE 165

Query: 233 SLSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKTVTKTIAEKNMTPTHAEGS 54
           ++S +                                   KT T+T+AEK + P     S
Sbjct: 166 TVSGKQENEKSP----------------------------KTPTQTVAEK-LAPACNTVS 196

Query: 53  EAPHSVTSKMQGLTVS 6
            A H++ SK+Q L VS
Sbjct: 197 VATHAIASKIQSLAVS 212


Top