BLASTX nr result

ID: Glycyrrhiza23_contig00030202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030202
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638436.1| Zinc finger CCCH domain-containing protein [...    67   2e-09
ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containin...    63   2e-08
ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containin...    63   2e-08
ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containin...    56   3e-06
emb|CBI26957.3| unnamed protein product [Vitis vinifera]               56   3e-06

>ref|XP_003638436.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355504371|gb|AES85574.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 139

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = +2

Query: 2   PYGHRCHFRHALTEQEKAISQPKPRTMKLDR 94
           PYGHRCHFRHALTEQEKA+SQPKPR+MKL+R
Sbjct: 109 PYGHRCHFRHALTEQEKAMSQPKPRSMKLER 139


>ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Glycine max]
          Length = 321

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   PYGHRCHFRHALTEQEKA-ISQPKPRTMKLDR 94
           PYGHRCHFRHALTEQEKA +SQPKPR+MKL+R
Sbjct: 290 PYGHRCHFRHALTEQEKAVVSQPKPRSMKLER 321


>ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Glycine max]
          Length = 360

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   PYGHRCHFRHALTEQEKA-ISQPKPRTMKLDR 94
           PYGHRCHFRHALTEQEKA +SQPKPR+MKL+R
Sbjct: 329 PYGHRCHFRHALTEQEKAVVSQPKPRSMKLER 360


>ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis
           vinifera]
          Length = 396

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +2

Query: 2   PYGHRCHFRHALTEQEKAISQPKPRTMKLDR 94
           PYGHRCHFRHALTEQE+ + Q +PR +KLDR
Sbjct: 366 PYGHRCHFRHALTEQERFMGQLQPRAIKLDR 396


>emb|CBI26957.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +2

Query: 2   PYGHRCHFRHALTEQEKAISQPKPRTMKLDR 94
           PYGHRCHFRHALTEQE+ + Q +PR +KLDR
Sbjct: 368 PYGHRCHFRHALTEQERFMGQLQPRAIKLDR 398


Top