BLASTX nr result

ID: Glycyrrhiza23_contig00030194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030194
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [G...   182   4e-44
ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [G...   180   2e-43
ref|XP_003606095.1| Transcription factor E2F [Medicago truncatul...   169   3e-40
emb|CBI28269.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   159   3e-37

>ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 435

 Score =  182 bits (462), Expect = 4e-44
 Identities = 92/126 (73%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   RSTMGPIDVYLISQFEEKFEENNG-DVAPNLPTSPEFNKHQSIVVSEDRGKDLEEMPGQD 179
           RSTMGPID+YL+SQFEEKFEE NG DVAP LP+SP+  KHQS VV EDRGKD+E + GQ+
Sbjct: 287 RSTMGPIDLYLVSQFEEKFEEINGVDVAPKLPSSPDGTKHQSTVVPEDRGKDIE-VQGQE 345

Query: 180 VHGPSSDFPASQDFVNGIMKIVPSDFDRDADYWLLSNDDVSLTDRWRTESGVEWNNLYTV 359
             GPSSDF  SQDFV+GIMKIVPSD   +ADYWLLS+ DVS+TD WRTE GVEWN L  +
Sbjct: 346 APGPSSDFTTSQDFVSGIMKIVPSD--SEADYWLLSDADVSITDMWRTEPGVEWNELEPL 403

Query: 360 QEDYCM 377
           QEDYCM
Sbjct: 404 QEDYCM 409


>ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 450

 Score =  180 bits (456), Expect = 2e-43
 Identities = 96/153 (62%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   RSTMGPIDVYLISQFEEKFEENNG-DVAPNLPTSPEFNKHQSIVVSEDRGKDLEEMPGQD 179
           RSTMGPID+YL+SQFEEKFEE NG DVAP LP+SP+  K QS VV EDRGK +E + GQ 
Sbjct: 300 RSTMGPIDLYLVSQFEEKFEEINGADVAPKLPSSPDVTKQQSTVVPEDRGKHIE-VQGQA 358

Query: 180 VHGPSSDFPASQDFVNGIMKIVPSDFDRDADYWLLSNDDVSLTDRWRTESGVEWNNLYTV 359
             GPSSDF  SQDFV+GIMKIVPSD   +ADYWLLS+ DVS+TD WRTE GVEWN L  +
Sbjct: 359 APGPSSDFTPSQDFVSGIMKIVPSDVASEADYWLLSDADVSITDMWRTEPGVEWNELEPL 418

Query: 360 QEDYCMXXXXXXXXXXXXXXXXXVPSVSNPAGG 458
           QEDYCM                 V S S P GG
Sbjct: 419 QEDYCM-TDENTTTPSHPSNVGEVSSASKPTGG 450


>ref|XP_003606095.1| Transcription factor E2F [Medicago truncatula]
           gi|355507150|gb|AES88292.1| Transcription factor E2F
           [Medicago truncatula]
          Length = 460

 Score =  169 bits (428), Expect = 3e-40
 Identities = 94/156 (60%), Positives = 105/156 (67%), Gaps = 4/156 (2%)
 Frame = +3

Query: 3   RSTMGPIDVYLISQFEEKFEENNG-DVAPNLPTSPEFNK---HQSIVVSEDRGKDLEEMP 170
           RSTMGPIDVYL+SQFEEKFEE NG DVA   P SPE NK    QS VV ED+GK++E + 
Sbjct: 307 RSTMGPIDVYLVSQFEEKFEEINGVDVASKFPPSPEVNKVNKDQSTVVPEDKGKEIE-VQ 365

Query: 171 GQDVHGPSSDFPASQDFVNGIMKIVPSDFDRDADYWLLSNDDVSLTDRWRTESGVEWNNL 350
            QD  GPSSD   + DFV+GIMKIVPSD   DADYWLLS+ DVS+TD WRTE GVEWN L
Sbjct: 366 RQDGEGPSSDLNNNHDFVSGIMKIVPSDVASDADYWLLSDADVSITDMWRTEPGVEWNEL 425

Query: 351 YTVQEDYCMXXXXXXXXXXXXXXXXXVPSVSNPAGG 458
             +QE+YCM                 VPS SNP  G
Sbjct: 426 EALQEEYCM-AREQSTTPNHASNIGEVPSASNPTVG 460


>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  159 bits (402), Expect = 3e-37
 Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
 Frame = +3

Query: 3   RSTMGPIDVYLISQFEEKFEENNG-DVAPNLPTSPEFNKHQS--IVVSEDRGKDLEEMPG 173
           RS+MGPIDVYL+SQFEEKFEE NG +  P+ P+S  +N+  +  +V  E RGK++E + G
Sbjct: 293 RSSMGPIDVYLVSQFEEKFEEINGLEAPPSFPSSSGYNEDPTAAMVTEESRGKEIE-IQG 351

Query: 174 QDVHGPSSDFPASQDFVNGIMKIVPSDFDRDADYWLLSNDDVSLTDRWRTESGVEWNNLY 353
           QD H  SSD  ASQDFV+GIMKIVPSD D DADYWLLS+ DVS+TD WRTE GVEWN L 
Sbjct: 352 QDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELD 411

Query: 354 TVQEDYCMXXXXXXXXXXXXXXXXXVPSVSNPAG 455
            + +DY M                 VP  +N  G
Sbjct: 412 ALNDDYAMANVSTPQPQTPPSSAAEVPPAANTPG 445


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  159 bits (402), Expect = 3e-37
 Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
 Frame = +3

Query: 3   RSTMGPIDVYLISQFEEKFEENNG-DVAPNLPTSPEFNKHQS--IVVSEDRGKDLEEMPG 173
           RS+MGPIDVYL+SQFEEKFEE NG +  P+ P+S  +N+  +  +V  E RGK++E + G
Sbjct: 304 RSSMGPIDVYLVSQFEEKFEEINGLEAPPSFPSSSGYNEDPTAAMVTEESRGKEIE-IQG 362

Query: 174 QDVHGPSSDFPASQDFVNGIMKIVPSDFDRDADYWLLSNDDVSLTDRWRTESGVEWNNLY 353
           QD H  SSD  ASQDFV+GIMKIVPSD D DADYWLLS+ DVS+TD WRTE GVEWN L 
Sbjct: 363 QDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELD 422

Query: 354 TVQEDYCMXXXXXXXXXXXXXXXXXVPSVSNPAG 455
            + +DY M                 VP  +N  G
Sbjct: 423 ALNDDYAMANVSTPQPQTPPSSAAEVPPAANTPG 456


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