BLASTX nr result

ID: Glycyrrhiza23_contig00030186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030186
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297868.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002304650.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
emb|CBI38190.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002890759.1| predicted protein [Arabidopsis lyrata subsp....    79   5e-13
ref|XP_003579650.1| PREDICTED: uncharacterized protein LOC100821...    70   2e-10

>ref|XP_002297868.1| predicted protein [Populus trichocarpa] gi|222845126|gb|EEE82673.1|
           predicted protein [Populus trichocarpa]
          Length = 62

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/56 (80%), Positives = 49/56 (87%)
 Frame = +3

Query: 9   LLQIEITCRGQQLLPFLTLQHVRDNIWTPRDNTTTRPLLSDSSTTDHVMVLHYGRS 176
           L+ IEITCRGQQL+PFLTLQHVRDNIW+PRD  T   LL +SSTTDHVMVLHYGRS
Sbjct: 9   LIYIEITCRGQQLVPFLTLQHVRDNIWSPRDALT---LLPESSTTDHVMVLHYGRS 61


>ref|XP_002304650.1| predicted protein [Populus trichocarpa] gi|222842082|gb|EEE79629.1|
           predicted protein [Populus trichocarpa]
          Length = 49

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/51 (80%), Positives = 45/51 (88%)
 Frame = +3

Query: 24  ITCRGQQLLPFLTLQHVRDNIWTPRDNTTTRPLLSDSSTTDHVMVLHYGRS 176
           +TCRGQQLLPFLTLQHVRDNIW+PR+  T   LL +SSTTDHVMVLHYGRS
Sbjct: 1   MTCRGQQLLPFLTLQHVRDNIWSPREELT---LLPESSTTDHVMVLHYGRS 48


>emb|CBI38190.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/54 (77%), Positives = 46/54 (85%)
 Frame = +3

Query: 15  QIEITCRGQQLLPFLTLQHVRDNIWTPRDNTTTRPLLSDSSTTDHVMVLHYGRS 176
           +IEITCRGQQLLPF TLQHVRDNIW+PRD  T   L  DSST+DHVMVL+YGRS
Sbjct: 297 EIEITCRGQQLLPFFTLQHVRDNIWSPRDALTF--LQPDSSTSDHVMVLNYGRS 348


>ref|XP_002890759.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336601|gb|EFH67018.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 55

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/54 (66%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
 Frame = +3

Query: 18  IEITCRGQQLLPFLTLQHVRDNIWTPRD-NTTTRPLLSDSSTTDHVMVLHYGRS 176
           +EI CRGQQL P LT+QHVRD+IWTP+  ++ +  LL DSSTTDHVM+LHYGR+
Sbjct: 1   VEIRCRGQQLSPLLTMQHVRDSIWTPKSPSSHSFTLLRDSSTTDHVMILHYGRT 54


>ref|XP_003579650.1| PREDICTED: uncharacterized protein LOC100821362 [Brachypodium
           distachyon]
          Length = 325

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +3

Query: 15  QIEITCRGQQLLPFLTLQHVRDNIWTPRDNTTTRPLLS-DSSTTDHVMVLHYGRST 179
           ++EITCRG+ LLPF+TLQH+RD+IW  RD     PL++ D ST +H+MVL YGR T
Sbjct: 272 EVEITCRGRPLLPFMTLQHLRDSIWCQRD--AVSPLVAPDMSTANHIMVLQYGRRT 325


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