BLASTX nr result

ID: Glycyrrhiza23_contig00030176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030176
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527593.1| PREDICTED: uncharacterized protein LOC100800...   232   2e-59
ref|XP_003602916.1| PHD and RING finger domain-containing protei...   228   3e-58
ref|XP_003522270.1| PREDICTED: bromodomain adjacent to zinc fing...   177   8e-43
ref|XP_002308115.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002308114.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_003527593.1| PREDICTED: uncharacterized protein LOC100800660 [Glycine max]
          Length = 487

 Score =  232 bits (592), Expect = 2e-59
 Identities = 109/131 (83%), Positives = 118/131 (90%)
 Frame = -1

Query: 393 LRGDSLADNVVSVEDAVTTGNSYCSRSCKICGHLDSSLNMLLCDNCEDSYHPSCYNPRLK 214
           L+ DS  DNV S EDAVTTGN+ CSRSCKICG LDSSLNMLLCD+CED+YH SCYNPRLK
Sbjct: 225 LKEDSPVDNVASGEDAVTTGNNCCSRSCKICGDLDSSLNMLLCDHCEDAYHLSCYNPRLK 284

Query: 213 KIPIDEWFCHSCLIKRQNILKETIIRSPGIHSEMGKCRTASVKAELNPILLMLRDTEPYR 34
           K+PIDEWFCHSCL KRQ ILKET+IRSP IH+E+GKCRTA VKAELNPILLMLRDT+PY 
Sbjct: 285 KLPIDEWFCHSCLKKRQKILKETVIRSPSIHNELGKCRTAPVKAELNPILLMLRDTKPYT 344

Query: 33  TGVRVGKGFQA 1
           TGVRVGKGFQA
Sbjct: 345 TGVRVGKGFQA 355


>ref|XP_003602916.1| PHD and RING finger domain-containing protein [Medicago truncatula]
           gi|355491964|gb|AES73167.1| PHD and RING finger
           domain-containing protein [Medicago truncatula]
          Length = 475

 Score =  228 bits (582), Expect = 3e-58
 Identities = 107/131 (81%), Positives = 117/131 (89%)
 Frame = -1

Query: 393 LRGDSLADNVVSVEDAVTTGNSYCSRSCKICGHLDSSLNMLLCDNCEDSYHPSCYNPRLK 214
           LRGD+L DNVVS+EDAVTT N+ CSRSCKICGHLDSSLNMLLCDNCE+SYHP CYN RLK
Sbjct: 236 LRGDTLTDNVVSIEDAVTTVNNCCSRSCKICGHLDSSLNMLLCDNCENSYHPCCYNTRLK 295

Query: 213 KIPIDEWFCHSCLIKRQNILKETIIRSPGIHSEMGKCRTASVKAELNPILLMLRDTEPYR 34
           ++PIDEWFCHSCL KRQ  LKETII+SP I+S +GK RT SVK E+NPILLMLRDTEPY 
Sbjct: 296 RVPIDEWFCHSCLNKRQKFLKETIIKSPRINSGIGKSRTVSVKDEMNPILLMLRDTEPYT 355

Query: 33  TGVRVGKGFQA 1
           TGVRVGKGFQA
Sbjct: 356 TGVRVGKGFQA 366


>ref|XP_003522270.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
           2A-like [Glycine max]
          Length = 224

 Score =  177 bits (449), Expect = 8e-43
 Identities = 80/92 (86%), Positives = 87/92 (94%)
 Frame = -1

Query: 276 MLLCDNCEDSYHPSCYNPRLKKIPIDEWFCHSCLIKRQNILKETIIRSPGIHSEMGKCRT 97
           MLLCD+CED+YH SCYNPRLKK+PIDEWFCHSCLIKRQ ILKET+IRSP IH+E+GKCRT
Sbjct: 1   MLLCDHCEDAYHLSCYNPRLKKLPIDEWFCHSCLIKRQKILKETVIRSPSIHNELGKCRT 60

Query: 96  ASVKAELNPILLMLRDTEPYRTGVRVGKGFQA 1
           A VKAELNPILLMLRDT+PY TGVRVGKGFQA
Sbjct: 61  APVKAELNPILLMLRDTKPYTTGVRVGKGFQA 92


>ref|XP_002308115.1| predicted protein [Populus trichocarpa] gi|222854091|gb|EEE91638.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/120 (59%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
 Frame = -1

Query: 360 SVEDAVTTGNSYCSRSCKICGHLDSSLNMLLCDNCEDSYHPSCYNPRLKKIPIDEWFCHS 181
           S+ D   +G+S  SR CK C    S + ML+CDNCEDS+H SC NPR+K+IP+DEW C S
Sbjct: 392 SIGDGSGSGSS-SSRPCKKCFRKGSPVKMLICDNCEDSFHVSCCNPRVKRIPVDEWLCRS 450

Query: 180 CLIKRQNILKETIIR-SPGIHSEMGKCRTASVKAELNPILLMLRDTEPYRTGVRVGKGFQ 4
           C  K++ I KETI R S  I  +MG+CR AS   E NPI LMLRDTEPY  GVRVGKGFQ
Sbjct: 451 CWKKKRIIPKETISRKSLNIIGDMGRCRDASSTGESNPIALMLRDTEPYTGGVRVGKGFQ 510


>ref|XP_002308114.1| predicted protein [Populus trichocarpa] gi|222854090|gb|EEE91637.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/120 (59%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
 Frame = -1

Query: 360 SVEDAVTTGNSYCSRSCKICGHLDSSLNMLLCDNCEDSYHPSCYNPRLKKIPIDEWFCHS 181
           S+ D   +G+S  SR CK C    S + ML+CDNCEDS+H SC NPR+K+IP+DEW C S
Sbjct: 465 SIGDGSGSGSS-SSRPCKKCFRKGSPVKMLICDNCEDSFHVSCCNPRVKRIPVDEWLCRS 523

Query: 180 CLIKRQNILKETIIR-SPGIHSEMGKCRTASVKAELNPILLMLRDTEPYRTGVRVGKGFQ 4
           C  K++ I KETI R S  I  +MG+CR AS   E NPI LMLRDTEPY  GVRVGKGFQ
Sbjct: 524 CWKKKRIIPKETISRKSLNIIGDMGRCRDASSTGESNPIALMLRDTEPYTGGVRVGKGFQ 583


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