BLASTX nr result

ID: Glycyrrhiza23_contig00030175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030175
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520556.1| PREDICTED: uncharacterized protein LOC100797...   220   1e-55
ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254...   167   1e-39
emb|CBI32346.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II tra...   162   3e-38
ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II tra...   161   6e-38

>ref|XP_003520556.1| PREDICTED: uncharacterized protein LOC100797410 [Glycine max]
          Length = 1386

 Score =  220 bits (560), Expect = 1e-55
 Identities = 105/130 (80%), Positives = 116/130 (89%)
 Frame = +2

Query: 14  ENIHELASYDCNTKSKLESNVVIPTGSQISFAGQSFGDSWSLLWLPIDLILEDALDGGQV 193
           +NIHE+ S++   KSK+E+N+V P GS +  AGQS+GDSWS LWLPIDLILEDALDG QV
Sbjct: 337 QNIHEVVSHELKKKSKMETNLVTPAGSLMPLAGQSYGDSWSSLWLPIDLILEDALDGAQV 396

Query: 194 AAFSAIEIIAGLVKTLHVVNGTMWHNTFLGLWIAALRLVQRERDSNEGPIPRLDTCMCML 373
           AAFSAIEII G+VKTLHVVNGTMWHNTFLGLW+AALRLVQRERD  EGPIPRLDTCMCML
Sbjct: 397 AAFSAIEIITGMVKTLHVVNGTMWHNTFLGLWVAALRLVQRERDLKEGPIPRLDTCMCML 456

Query: 374 LSITTLVVTN 403
           LSITTLVVTN
Sbjct: 457 LSITTLVVTN 466


>ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254459 [Vitis vinifera]
          Length = 1321

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/134 (58%), Positives = 97/134 (72%)
 Frame = +2

Query: 2   LSLMENIHELASYDCNTKSKLESNVVIPTGSQISFAGQSFGDSWSLLWLPIDLILEDALD 181
           L L  +   + + +C T  + + + V+ +GS IS AGQ  G SWS LWLPID+ LED +D
Sbjct: 288 LQLTSDARIVLTRECKTSLQKQFHAVVASGSLISSAGQCHGVSWSALWLPIDMFLEDTMD 347

Query: 182 GGQVAAFSAIEIIAGLVKTLHVVNGTMWHNTFLGLWIAALRLVQRERDSNEGPIPRLDTC 361
             QV A SA+E + GLVK L  VNGT WHNTFLG+WIAALRLVQRERD +EGP+PRLDTC
Sbjct: 348 DSQVVATSAVETLTGLVKALQAVNGTSWHNTFLGVWIAALRLVQRERDPSEGPVPRLDTC 407

Query: 362 MCMLLSITTLVVTN 403
           +CMLLSIT L + N
Sbjct: 408 LCMLLSITPLAIVN 421


>emb|CBI32346.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/134 (58%), Positives = 97/134 (72%)
 Frame = +2

Query: 2   LSLMENIHELASYDCNTKSKLESNVVIPTGSQISFAGQSFGDSWSLLWLPIDLILEDALD 181
           L L  +   + + +C T  + + + V+ +GS IS AGQ  G SWS LWLPID+ LED +D
Sbjct: 339 LQLTSDARIVLTRECKTSLQKQFHAVVASGSLISSAGQCHGVSWSALWLPIDMFLEDTMD 398

Query: 182 GGQVAAFSAIEIIAGLVKTLHVVNGTMWHNTFLGLWIAALRLVQRERDSNEGPIPRLDTC 361
             QV A SA+E + GLVK L  VNGT WHNTFLG+WIAALRLVQRERD +EGP+PRLDTC
Sbjct: 399 DSQVVATSAVETLTGLVKALQAVNGTSWHNTFLGVWIAALRLVQRERDPSEGPVPRLDTC 458

Query: 362 MCMLLSITTLVVTN 403
           +CMLLSIT L + N
Sbjct: 459 LCMLLSITPLAIVN 472


>ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Cucumis sativus]
          Length = 1335

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/116 (68%), Positives = 94/116 (81%), Gaps = 1/116 (0%)
 Frame = +2

Query: 56  SKLESNVVIPTGSQISFAGQSFGDSWSLLWLPIDLILEDALDGGQVAAFSAIE-IIAGLV 232
           S+LE   V+ +GS  S AGQS G +WS LWLPIDL LEDA+DG QV A SA+E + AGL+
Sbjct: 305 SQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVEQLSAGLI 364

Query: 233 KTLHVVNGTMWHNTFLGLWIAALRLVQRERDSNEGPIPRLDTCMCMLLSITTLVVT 400
           K+L  VN T WHNTFLGLWIAALRL+QRERD +EGP+PRLDTC+CMLLSI+TL VT
Sbjct: 365 KSLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVT 420


>ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like [Cucumis sativus]
          Length = 739

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/115 (67%), Positives = 92/115 (80%)
 Frame = +2

Query: 56  SKLESNVVIPTGSQISFAGQSFGDSWSLLWLPIDLILEDALDGGQVAAFSAIEIIAGLVK 235
           S+LE   V+ +GS  S AGQS G +WS LWLPIDL LEDA+DG QV A SA+E +  L+K
Sbjct: 516 SQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIK 575

Query: 236 TLHVVNGTMWHNTFLGLWIAALRLVQRERDSNEGPIPRLDTCMCMLLSITTLVVT 400
           +L  VN T WHNTFLGLWIAALRL+QRERD +EGP+PRLDTC+CMLLSI+TL VT
Sbjct: 576 SLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVT 630


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