BLASTX nr result
ID: Glycyrrhiza23_contig00030173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00030173
(523 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containi... 295 3e-78
ref|XP_003614030.1| Pentatricopeptide repeat-containing protein ... 295 4e-78
ref|XP_003533540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 271 5e-71
ref|XP_002324059.1| predicted protein [Populus trichocarpa] gi|2... 258 5e-67
ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinu... 249 2e-64
>ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Glycine max]
Length = 505
Score = 295 bits (755), Expect = 3e-78
Identities = 142/176 (80%), Positives = 155/176 (88%), Gaps = 2/176 (1%)
Frame = -1
Query: 523 FYGCCKKILDARKMFDEMPERTLVSWNSVITACVENVWLRDGIEYFLTMWGSGFEPDETT 344
FYGCCKKI+DARK+F EMPERT+VSWNSV+TACVE++WL DGI YF MWG GFEPDET+
Sbjct: 160 FYGCCKKIVDARKVFGEMPERTVVSWNSVMTACVESLWLGDGIGYFFRMWGCGFEPDETS 219
Query: 343 MVLLLSACAVLGYMSLGRWVHSQVVLRGMALSCHLGTALVDMYAKSGALGYARLVFEIME 164
MVLLLSACA LGY+SLGRWVHSQ+VLRGM LS LGTALVDMY KSGALGYAR VFE ME
Sbjct: 220 MVLLLSACAELGYLSLGRWVHSQLVLRGMVLSVQLGTALVDMYGKSGALGYARDVFERME 279
Query: 163 KRNVWTWSAMILGLAQHGFAEEALELFDMMSKRNSNN--ICPNYVTYLGVLCACSH 2
RNVWTWSAMILGLAQHGF EEALELF +M+ N++N I PNYVTYLGVLCACSH
Sbjct: 280 NRNVWTWSAMILGLAQHGFGEEALELFAIMNNNNNDNRDIRPNYVTYLGVLCACSH 335
>ref|XP_003614030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515365|gb|AES96988.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 498
Score = 295 bits (754), Expect = 4e-78
Identities = 140/174 (80%), Positives = 153/174 (87%)
Frame = -1
Query: 523 FYGCCKKILDARKMFDEMPERTLVSWNSVITACVENVWLRDGIEYFLTMWGSGFEPDETT 344
FYGCCKKI+ ARK+FDEM RT+VSWNSV+TACVENVWL DGI YF M FEPDET+
Sbjct: 155 FYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPDETS 214
Query: 343 MVLLLSACAVLGYMSLGRWVHSQVVLRGMALSCHLGTALVDMYAKSGALGYARLVFEIME 164
MVLLLS CA LGY+SLGRWVHSQ++L+GM LS HLGTALVDMY KSGALGYAR+VFE ME
Sbjct: 215 MVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDMYGKSGALGYARVVFERME 274
Query: 163 KRNVWTWSAMILGLAQHGFAEEALELFDMMSKRNSNNICPNYVTYLGVLCACSH 2
KRNVWTWSAMI+GLAQHGFAEEAL LFDMM+ + SNNI PNYVTYLGVLCACSH
Sbjct: 275 KRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSH 328
>ref|XP_003533540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g36730-like [Glycine max]
Length = 407
Score = 271 bits (692), Expect = 5e-71
Identities = 136/181 (75%), Positives = 150/181 (82%), Gaps = 7/181 (3%)
Frame = -1
Query: 523 FYGCCKKILDARKMFDEMPERTLVSWNSVITACVEN----VWLRDGIEYFLTMWGSGFEP 356
FY CCKKI+DA K+F++MP++T+VS NSVITACVE+ +W DGIEYF MWG GFEP
Sbjct: 59 FYWCCKKIVDAXKVFEKMPDKTIVSXNSVITACVESCVESLWSGDGIEYFFRMWGCGFEP 118
Query: 355 DETTMVLLLSACAVLGYMSLGRWVHSQVVLRGMALSCHLGTALVDMYAKSGALGYARLVF 176
D T+MVLLLSACA LGY+SLGRWVHSQ+VLRGM LS LGTALVDMY KSGALGYAR VF
Sbjct: 119 DXTSMVLLLSACAELGYLSLGRWVHSQLVLRGMVLSVQLGTALVDMYGKSGALGYARAVF 178
Query: 175 EIMEKRNVWTWSAMILGLAQH-GFAEEALELFDMMSKRNSN--NICPNYVTYLGVLCACS 5
E MEKRNVWTWSAMILGLA H GF EE L LF MMS N+N +I PNYVTYLGVLCACS
Sbjct: 179 ERMEKRNVWTWSAMILGLAPHAGFREEVLALFAMMSNNNNNSRDIRPNYVTYLGVLCACS 238
Query: 4 H 2
H
Sbjct: 239 H 239
>ref|XP_002324059.1| predicted protein [Populus trichocarpa] gi|222867061|gb|EEF04192.1|
predicted protein [Populus trichocarpa]
Length = 505
Score = 258 bits (658), Expect = 5e-67
Identities = 122/173 (70%), Positives = 145/173 (83%)
Frame = -1
Query: 520 YGCCKKILDARKMFDEMPERTLVSWNSVITACVENVWLRDGIEYFLTMWGSGFEPDETTM 341
YG CK+I DA K+FDEMP R++VSWNSVITACV+N+WL D I F+ M GFEP+ETTM
Sbjct: 164 YGSCKRIWDACKVFDEMPVRSIVSWNSVITACVQNLWLGDAIWNFVKMKDFGFEPNETTM 223
Query: 340 VLLLSACAVLGYMSLGRWVHSQVVLRGMALSCHLGTALVDMYAKSGALGYARLVFEIMEK 161
V++LS CA +G +SLGRW+HSQV+ RGM L+C LGTALVDMYAKSG LGYA+LVF+ MEK
Sbjct: 224 VIMLSLCAQIGNLSLGRWIHSQVIERGMTLNCQLGTALVDMYAKSGDLGYAKLVFDRMEK 283
Query: 160 RNVWTWSAMILGLAQHGFAEEALELFDMMSKRNSNNICPNYVTYLGVLCACSH 2
+NVWTWSAMILGLAQHGF +E LELF + + S +ICPNYVT+LGVLCACSH
Sbjct: 284 KNVWTWSAMILGLAQHGFGKEGLELF--LKMKESVSICPNYVTFLGVLCACSH 334
>ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH,
putative [Ricinus communis]
Length = 1157
Score = 249 bits (635), Expect = 2e-64
Identities = 123/175 (70%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
Frame = -1
Query: 523 FYGCCKKILDARKMFDEMPERTLVSWNSVITACVENVWLRDGIEYFLTMWGSGFEPDETT 344
FYG CKKILDA K+FDEMPERT+VSWN+VIT+CVE++ L + I YFL M GFEPD TT
Sbjct: 808 FYGSCKKILDACKVFDEMPERTVVSWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGTT 867
Query: 343 MVLLLSACAVLGYMSLGRWVHSQVVLRGMALSCHLGTALVDMYAKSGALGYARLVFEIME 164
MVL+L CA +G + LGRW+HSQV+ RG+ L+ LGTALVDMYAKSGA+GYA+LVF+ M+
Sbjct: 868 MVLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMK 927
Query: 163 KRNVWTWSAMILGLAQHGFAEEALELF-DMMSKRNSNNICPNYVTYLGVLCACSH 2
++NVWTWSAMILGLAQHGFA+E LELF DMM S+ I PNYVT+LGVLCACSH
Sbjct: 928 EKNVWTWSAMILGLAQHGFAKEGLELFLDMM---RSSLIHPNYVTFLGVLCACSH 979
Score = 57.0 bits (136), Expect = 2e-06
Identities = 36/142 (25%), Positives = 62/142 (43%)
Frame = -1
Query: 508 KKILDARKMFDEMPERTLVSWNSVITACVENVWLRDGIEYFLTMWGSGFEPDETTMVLLL 329
K + A+ + D + WN +I ++ +D + + M G P+ T LL
Sbjct: 712 KDLSYAQSILDHSVHPVPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLL 771
Query: 328 SACAVLGYMSLGRWVHSQVVLRGMALSCHLGTALVDMYAKSGALGYARLVFEIMEKRNVW 149
ACA G+ VH +V+ G+ ++ LV+ Y + A VF+ M +R V
Sbjct: 772 KACAACFATKEGKQVHVEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDEMPERTVV 831
Query: 148 TWSAMILGLAQHGFAEEALELF 83
+W+A+I + EA+ F
Sbjct: 832 SWNAVITSCVESLKLGEAIRYF 853