BLASTX nr result

ID: Glycyrrhiza23_contig00030149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030149
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595571.1| Phytochrome E [Medicago truncatula] gi|87241...   207   6e-52
ref|XP_003535030.1| PREDICTED: phytochrome E-like [Glycine max]       201   4e-50
ref|XP_003546574.1| PREDICTED: phytochrome E-like [Glycine max]       201   5e-50
ref|XP_002519749.1| phytochrome B, putative [Ricinus communis] g...   190   1e-46
emb|CBI30813.3| unnamed protein product [Vitis vinifera]              188   5e-46

>ref|XP_003595571.1| Phytochrome E [Medicago truncatula] gi|87241383|gb|ABD33241.1|
           Bacteriophytochrome [Medicago truncatula]
           gi|355484619|gb|AES65822.1| Phytochrome E [Medicago
           truncatula]
          Length = 1122

 Score =  207 bits (528), Expect = 6e-52
 Identities = 108/132 (81%), Positives = 116/132 (87%), Gaps = 1/132 (0%)
 Frame = -2

Query: 395 ELRSVALEMVRLIETATVPIFGVDSDGLINGWNVKIAELTGLLASEAMGKSLANEVVHAD 216
           E+ S+ALEMVRLIETA VPIFGVDSDGLINGWNVKIAELTGL  SEAMGKSL NEVVH D
Sbjct: 599 EISSIALEMVRLIETAAVPIFGVDSDGLINGWNVKIAELTGLPTSEAMGKSLENEVVHVD 658

Query: 215 SRETLTNIIRRALQGQEDKNVELKIKHFGLHQEK-VVYLMASACTSRDYTNAIVGVCFVG 39
           SRETLTNI+RRALQGQ++KNVELKI  F LHQEK VVYLM S+C SRDYTNAIVGV FVG
Sbjct: 659 SRETLTNILRRALQGQDNKNVELKINRFVLHQEKEVVYLMISSCISRDYTNAIVGVGFVG 718

Query: 38  QDITHEKAVLDK 3
           QDIT EK ++ K
Sbjct: 719 QDITFEKVIVKK 730


>ref|XP_003535030.1| PREDICTED: phytochrome E-like [Glycine max]
          Length = 1120

 Score =  201 bits (512), Expect = 4e-50
 Identities = 103/133 (77%), Positives = 115/133 (86%), Gaps = 1/133 (0%)
 Frame = -2

Query: 398 DELRSVALEMVRLIETATVPIFGVDSDGLINGWNVKIAELTGLLASEAMGKSLANEVVHA 219
           DEL SVALEMVRLIETATVPIFGVD  G+INGWN KIAELTGL ASEAMGKSL NE++HA
Sbjct: 599 DELSSVALEMVRLIETATVPIFGVDLGGVINGWNTKIAELTGLQASEAMGKSLVNEIIHA 658

Query: 218 DSRETLTNIIRRALQGQEDKNVELKIKHFGL-HQEKVVYLMASACTSRDYTNAIVGVCFV 42
           DS +T  + + RALQGQEDKNVELKIKHFGL  Q++V YL+ +ACTSRD+T+AIVGVCFV
Sbjct: 659 DSCDTFKSTLSRALQGQEDKNVELKIKHFGLDQQQEVAYLVVNACTSRDHTDAIVGVCFV 718

Query: 41  GQDITHEKAVLDK 3
           GQDIT EK V DK
Sbjct: 719 GQDITCEKVVQDK 731


>ref|XP_003546574.1| PREDICTED: phytochrome E-like [Glycine max]
          Length = 1121

 Score =  201 bits (511), Expect = 5e-50
 Identities = 102/133 (76%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
 Frame = -2

Query: 398 DELRSVALEMVRLIETATVPIFGVDSDGLINGWNVKIAELTGLLASEAMGKSLANEVVHA 219
           DEL SVAL+MVRLIETATVPIFGVD  G+INGWN KIAELTGL ASEAMGKSL NE++HA
Sbjct: 600 DELSSVALQMVRLIETATVPIFGVDLGGVINGWNTKIAELTGLQASEAMGKSLVNEIIHA 659

Query: 218 DSRETLTNIIRRALQGQEDKNVELKIKHFGL-HQEKVVYLMASACTSRDYTNAIVGVCFV 42
           DS +T  N + RALQGQEDKNVELKIKHFGL  Q++V  LM +AC SRDYT+AIVGVCFV
Sbjct: 660 DSGDTFKNTLSRALQGQEDKNVELKIKHFGLDQQQEVACLMVNACISRDYTDAIVGVCFV 719

Query: 41  GQDITHEKAVLDK 3
           G+DIT+EK V DK
Sbjct: 720 GEDITYEKVVQDK 732


>ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
            gi|223541166|gb|EEF42722.1| phytochrome B, putative
            [Ricinus communis]
          Length = 1131

 Score =  190 bits (482), Expect = 1e-46
 Identities = 94/133 (70%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
 Frame = -2

Query: 398  DELRSVALEMVRLIETATVPIFGVDSDGLINGWNVKIAELTGLLASEAMGKSLANEVVHA 219
            DEL SVA EMVRLIETAT PIFGVDS G +NGWN KIAELTGL ASEAMGKSL  EVVH 
Sbjct: 606  DELSSVACEMVRLIETATAPIFGVDSAGSVNGWNAKIAELTGLQASEAMGKSLVREVVHK 665

Query: 218  DSRETLTNIIRRALQGQEDKNVELKIKHFGLHQE-KVVYLMASACTSRDYTNAIVGVCFV 42
            DS E + +++ RALQG+EDKNVELK++ FGLHQ+   V+++A+ACTSRDY N ++GVCFV
Sbjct: 666  DSYEFVESLLCRALQGEEDKNVELKLRKFGLHQQNSAVFVVANACTSRDYANNVIGVCFV 725

Query: 41   GQDITHEKAVLDK 3
            GQD+T EK V+DK
Sbjct: 726  GQDVTSEKIVMDK 738


>emb|CBI30813.3| unnamed protein product [Vitis vinifera]
          Length = 877

 Score =  188 bits (477), Expect = 5e-46
 Identities = 94/133 (70%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
 Frame = -2

Query: 398 DELRSVALEMVRLIETATVPIFGVDSDGLINGWNVKIAELTGLLASEAMGKSLANEVVHA 219
           +EL SVA EMV+LIETAT PIFGVDS G INGWN KIAELTGL A EAMGKSL +E+VH 
Sbjct: 359 NELGSVACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTGLQAKEAMGKSLVDEIVHE 418

Query: 218 DSRETLTNIIRRALQGQEDKNVELKIKHFGLH-QEKVVYLMASACTSRDYTNAIVGVCFV 42
           D R  + N++ RALQG+EDKNVELK+K+FGL+ Q+  +Y++ +ACTSRDYTN IVGVCFV
Sbjct: 419 DLRGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACTSRDYTNDIVGVCFV 478

Query: 41  GQDITHEKAVLDK 3
           GQDIT EK V+DK
Sbjct: 479 GQDITSEKIVMDK 491


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