BLASTX nr result

ID: Glycyrrhiza23_contig00030104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030104
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602445.1| ABC transporter ATP-binding protein/permease...   196   5e-63
ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, AB...   178   1e-54
gb|AFW57329.1| hypothetical protein ZEAMMB73_128411 [Zea mays]        171   2e-54
dbj|BAC99416.1| putative MDR-like ABC transporter [Oryza sativa ...   172   5e-54
emb|CAD59579.1| MDR-like ABC transporter [Oryza sativa Japonica ...   172   5e-54

>ref|XP_003602445.1| ABC transporter ATP-binding protein/permease [Medicago truncatula]
            gi|355491493|gb|AES72696.1| ABC transporter ATP-binding
            protein/permease [Medicago truncatula]
          Length = 1342

 Score =  196 bits (498), Expect(2) = 5e-63
 Identities = 98/107 (91%), Positives = 103/107 (96%)
 Frame = -2

Query: 425  FVGVLRNEVGWFDKPDNTVGSLTSRIISDTAMVKIIIADRMSVIVQCVSSILIATIVSMY 246
            + GVL NEVGWFDKP+NTVGSLTSRIISDT+MVKIIIADRMSVIVQCVSSILIAT VSMY
Sbjct: 848  YSGVLCNEVGWFDKPENTVGSLTSRIISDTSMVKIIIADRMSVIVQCVSSILIATGVSMY 907

Query: 245  VNWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYSAAHSEIVALASE 105
            VNWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYSA HS++VALASE
Sbjct: 908  VNWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYSATHSDLVALASE 954



 Score = 70.1 bits (170), Expect(2) = 5e-63
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = -3

Query: 103  GIIQGFSLCLWNIAHAVALWYTTILVDRGQAKFE 2
            GIIQGFSLCLWNIAHAVALWYTTILVDR QA FE
Sbjct: 994  GIIQGFSLCLWNIAHAVALWYTTILVDRRQASFE 1027


>ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222868335|gb|EEF05466.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1275

 Score =  178 bits (451), Expect(2) = 1e-54
 Identities = 88/107 (82%), Positives = 98/107 (91%)
 Frame = -2

Query: 425  FVGVLRNEVGWFDKPDNTVGSLTSRIISDTAMVKIIIADRMSVIVQCVSSILIATIVSMY 246
            + GVL NE+ WF+KP+NTVGSLTSRII+DT+ VKIII+DRMSVIVQC+SSILIATIVSM 
Sbjct: 782  YSGVLLNELAWFEKPENTVGSLTSRIINDTSKVKIIISDRMSVIVQCLSSILIATIVSMV 841

Query: 245  VNWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYSAAHSEIVALASE 105
            VNWRM LVAWAVMPCHFIGGLIQAKSAKGFSGD +AAH E+V LASE
Sbjct: 842  VNWRMGLVAWAVMPCHFIGGLIQAKSAKGFSGDSAAAHYELVELASE 888



 Score = 60.5 bits (145), Expect(2) = 1e-54
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -3

Query: 103  GIIQGFSLCLWNIAHAVALWYTTILVDRGQAKF 5
            G+IQG SLCLWNIAHAVALWYTT LVD+ QA F
Sbjct: 928  GLIQGVSLCLWNIAHAVALWYTTHLVDKHQATF 960


>gb|AFW57329.1| hypothetical protein ZEAMMB73_128411 [Zea mays]
          Length = 1240

 Score =  171 bits (432), Expect(2) = 2e-54
 Identities = 83/107 (77%), Positives = 96/107 (89%)
 Frame = -2

Query: 425  FVGVLRNEVGWFDKPDNTVGSLTSRIISDTAMVKIIIADRMSVIVQCVSSILIATIVSMY 246
            F  VLRNE+GWF+KP+N VG LTSRI+SDT+ VK II+DRM+VIVQC++SILIATIVSM 
Sbjct: 747  FSAVLRNELGWFEKPNNGVGFLTSRIVSDTSTVKTIISDRMAVIVQCIASILIATIVSMK 806

Query: 245  VNWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYSAAHSEIVALASE 105
            VNWRMALV+WAVMPCHFIGGLIQAKSAKGF GD + AH E+V+LASE
Sbjct: 807  VNWRMALVSWAVMPCHFIGGLIQAKSAKGFYGDSAIAHRELVSLASE 853



 Score = 66.6 bits (161), Expect(2) = 2e-54
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -3

Query: 103 GIIQGFSLCLWNIAHAVALWYTTILVDRGQAKFE 2
           G+IQG SLCLWNIAHAVALWYTT+LV R QAKFE
Sbjct: 893 GVIQGISLCLWNIAHAVALWYTTVLVQRKQAKFE 926


>dbj|BAC99416.1| putative MDR-like ABC transporter [Oryza sativa Japonica Group]
            gi|37806247|dbj|BAC99764.1| putative MDR-like ABC
            transporter [Oryza sativa Japonica Group]
            gi|222639927|gb|EEE68059.1| hypothetical protein
            OsJ_26065 [Oryza sativa Japonica Group]
          Length = 1261

 Score =  172 bits (435), Expect(2) = 5e-54
 Identities = 82/107 (76%), Positives = 95/107 (88%)
 Frame = -2

Query: 425  FVGVLRNEVGWFDKPDNTVGSLTSRIISDTAMVKIIIADRMSVIVQCVSSILIATIVSMY 246
            F  VLRNE+GWF+KP N VG LTSRI+SDT+ VK II+DRM+VIVQC+SSILIAT+VSMY
Sbjct: 768  FSSVLRNELGWFEKPKNGVGFLTSRIVSDTSTVKTIISDRMAVIVQCISSILIATVVSMY 827

Query: 245  VNWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYSAAHSEIVALASE 105
            VNWRM LV+WAVMPCHFIGGLIQAK+AKGF GD + AH E+V+LASE
Sbjct: 828  VNWRMGLVSWAVMPCHFIGGLIQAKAAKGFYGDSAIAHQELVSLASE 874



 Score = 64.3 bits (155), Expect(2) = 5e-54
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 103  GIIQGFSLCLWNIAHAVALWYTTILVDRGQAKFE 2
            G++QG SLCLWNIAHAVALWYTT+LV R QA FE
Sbjct: 914  GVVQGISLCLWNIAHAVALWYTTVLVQRKQASFE 947


>emb|CAD59579.1| MDR-like ABC transporter [Oryza sativa Japonica Group]
          Length = 1242

 Score =  172 bits (435), Expect(2) = 5e-54
 Identities = 82/107 (76%), Positives = 95/107 (88%)
 Frame = -2

Query: 425  FVGVLRNEVGWFDKPDNTVGSLTSRIISDTAMVKIIIADRMSVIVQCVSSILIATIVSMY 246
            F  VLRNE+GWF+KP N VG LTSRI+SDT+ VK II+DRM+VIVQC+SSILIAT+VSMY
Sbjct: 749  FSSVLRNELGWFEKPKNGVGFLTSRIVSDTSTVKTIISDRMAVIVQCISSILIATVVSMY 808

Query: 245  VNWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYSAAHSEIVALASE 105
            VNWRM LV+WAVMPCHFIGGLIQAK+AKGF GD + AH E+V+LASE
Sbjct: 809  VNWRMGLVSWAVMPCHFIGGLIQAKAAKGFYGDSAIAHQELVSLASE 855



 Score = 64.3 bits (155), Expect(2) = 5e-54
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 103 GIIQGFSLCLWNIAHAVALWYTTILVDRGQAKFE 2
           G++QG SLCLWNIAHAVALWYTT+LV R QA FE
Sbjct: 895 GVVQGISLCLWNIAHAVALWYTTVLVQRKQASFE 928


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