BLASTX nr result

ID: Glycyrrhiza23_contig00030101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030101
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ...   214   4e-54
ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi...   213   2e-53
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   207   5e-52
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   206   2e-51
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   206   2e-51

>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512235|gb|AES93858.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  214 bits (546), Expect = 4e-54
 Identities = 105/118 (88%), Positives = 113/118 (95%)
 Frame = -2

Query: 355  LVENLRQRCSKVDRKVWNALIHAYALSGCYERARAIFNTMMRDGPSPTVDSINGLLQALI 176
            +VENLRQRCSK+DRKVWNALIHAYA SGCYERARAIFNTMMR+GPSPTV+S+NGLLQALI
Sbjct: 811  IVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALI 870

Query: 175  ADGRLNELYVVIQELQDMGFKITKSSILLMLEAFAQAGNLFEVQKVYHGMKAAGYLPT 2
             DGRL+ELYVVIQELQDM  KI+KSSILLMLEAFAQAGNLFEVQKVY+GMKAAGY PT
Sbjct: 871  VDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPT 928


>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Glycine max]
          Length = 1476

 Score =  213 bits (541), Expect = 2e-53
 Identities = 105/118 (88%), Positives = 111/118 (94%)
 Frame = -2

Query: 355  LVENLRQRCSKVDRKVWNALIHAYALSGCYERARAIFNTMMRDGPSPTVDSINGLLQALI 176
            LV +LRQRCSK+DRKVWNALIHAYA SGCYERARAIFNTMMRDGPSPTVDS+NGLLQALI
Sbjct: 796  LVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALI 855

Query: 175  ADGRLNELYVVIQELQDMGFKITKSSILLMLEAFAQAGNLFEVQKVYHGMKAAGYLPT 2
             D RLNELYVVIQELQDMG KI+KSSILL LEAFAQAGNLFEVQK+Y+GMKAAGY PT
Sbjct: 856  VDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPT 913


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
            predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  207 bits (528), Expect = 5e-52
 Identities = 100/115 (86%), Positives = 109/115 (94%)
 Frame = -2

Query: 346  NLRQRCSKVDRKVWNALIHAYALSGCYERARAIFNTMMRDGPSPTVDSINGLLQALIADG 167
            NLRQRC  VDRKVWNALI AYA SGCYERARAIFNTMMRDGPSPTVD+INGLLQALI DG
Sbjct: 803  NLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDG 862

Query: 166  RLNELYVVIQELQDMGFKITKSSILLMLEAFAQAGNLFEVQKVYHGMKAAGYLPT 2
            RL+ELYVV+QELQDMGFKI+KSSILLML+AFA+AGN+FEV+K+YHGMKAAGY PT
Sbjct: 863  RLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPT 917


>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  206 bits (524), Expect = 2e-51
 Identities = 99/118 (83%), Positives = 110/118 (93%)
 Frame = -2

Query: 355  LVENLRQRCSKVDRKVWNALIHAYALSGCYERARAIFNTMMRDGPSPTVDSINGLLQALI 176
            LV +LRQ+C+ VDRKVWNALIHAYA SGCYERARAIFNTMMRDGPSPTVDS+NGL+QALI
Sbjct: 769  LVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALI 828

Query: 175  ADGRLNELYVVIQELQDMGFKITKSSILLMLEAFAQAGNLFEVQKVYHGMKAAGYLPT 2
             DGRL+ELYVVIQELQDMGFKI+KSSI LML+AFA AGN+FEV+K+Y GMKAAGY PT
Sbjct: 829  VDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPT 886


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  206 bits (524), Expect = 2e-51
 Identities = 99/118 (83%), Positives = 110/118 (93%)
 Frame = -2

Query: 355  LVENLRQRCSKVDRKVWNALIHAYALSGCYERARAIFNTMMRDGPSPTVDSINGLLQALI 176
            LV +LRQ+C+ VDRKVWNALIHAYA SGCYERARAIFNTMMRDGPSPTVDS+NGL+QALI
Sbjct: 801  LVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALI 860

Query: 175  ADGRLNELYVVIQELQDMGFKITKSSILLMLEAFAQAGNLFEVQKVYHGMKAAGYLPT 2
             DGRL+ELYVVIQELQDMGFKI+KSSI LML+AFA AGN+FEV+K+Y GMKAAGY PT
Sbjct: 861  VDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPT 918


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