BLASTX nr result

ID: Glycyrrhiza23_contig00030099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030099
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606095.1| Transcription factor E2F [Medicago truncatul...   110   1e-22
ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [G...   105   3e-21
gb|ACJ85122.1| unknown [Medicago truncatula]                          101   6e-20
ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [G...    99   3e-19
emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]        83   2e-14

>ref|XP_003606095.1| Transcription factor E2F [Medicago truncatula]
           gi|355507150|gb|AES88292.1| Transcription factor E2F
           [Medicago truncatula]
          Length = 460

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/92 (61%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
 Frame = -3

Query: 267 QLPISSTKPPFAPNGGYHRFASDHCPPPQNDAEAIVVKSP---RKSDIADFEADSGDRMT 97
           QLP SS KPPF     YHRFA DH      + EAIVVK+P   RKS+ ADFEADSGDRMT
Sbjct: 21  QLPFSSMKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMT 80

Query: 96  PASTEAANSPLQMPISGKMRKSSKASRLTKCD 1
           P ST AANS +Q P+SGK  K  K+SR+TKC+
Sbjct: 81  PGSTAAANSSVQTPVSGKAGKGGKSSRMTKCN 112


>ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 435

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/90 (64%), Positives = 63/90 (70%), Gaps = 3/90 (3%)
 Frame = -3

Query: 267 QLPISSTKPPFAPNGGYHRFASDHCPPPQNDAEAIVVKSP---RKSDIADFEADSGDRMT 97
           QLP SS KPPF   G YHRFA D      + AEAIVVK+P   RKS+ ADFEADSGDRMT
Sbjct: 4   QLPFSSMKPPFVAAGDYHRFAPDQ---RHDAAEAIVVKTPQLKRKSEAADFEADSGDRMT 60

Query: 96  PASTEAANSPLQMPISGKMRKSSKASRLTK 7
           P  TEAANSP Q P+SGK  K  K+ RLTK
Sbjct: 61  PGFTEAANSPFQTPVSGKTGKGGKSFRLTK 90


>gb|ACJ85122.1| unknown [Medicago truncatula]
          Length = 224

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/85 (61%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
 Frame = -3

Query: 246 KPPFAPNGGYHRFASDHCPPPQNDAEAIVVKSP---RKSDIADFEADSGDRMTPASTEAA 76
           KPPF     YHRFA DH      + EAIVVK+P   RKS+ ADFEADSGDRMTP ST AA
Sbjct: 2   KPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAAA 61

Query: 75  NSPLQMPISGKMRKSSKASRLTKCD 1
           NS +Q P+SGK  K  K+SR+TKC+
Sbjct: 62  NSSVQTPVSGKAGKGGKSSRMTKCN 86


>ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 450

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/90 (61%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
 Frame = -3

Query: 267 QLPISSTKPPFAPNGGYHRFASDHCPPPQNDAEAIVVKSP---RKSDIADFEADSGDRMT 97
           QLP SS KPPF   G YHR          + AEAIVVK+P   RKS++ADFEADSGDRMT
Sbjct: 23  QLPFSSMKPPFVAAGDYHR---------HDAAEAIVVKTPLLKRKSEVADFEADSGDRMT 73

Query: 96  PASTEAANSPLQMPISGKMRKSSKASRLTK 7
              TEAANSP Q P+SGK  K  K+SRLTK
Sbjct: 74  AGFTEAANSPFQTPVSGKTGKGGKSSRLTK 103


>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
 Frame = -3

Query: 267 QLPISSTKPPFAPN-GGYHRFASDHCPPPQNDAEAIVVKSP---RKSDIADFEADSGD-R 103
           QLP +S KPPF P+ G YHRF SD+  PP  D E IVVK+P   RKSD A+++A+S D  
Sbjct: 19  QLPFTSMKPPFVPSPGDYHRF-SDNRAPPAPDPETIVVKTPPMKRKSDTAEYDAESSDWT 77

Query: 102 MTPASTEAANSPLQMPISGKMRKSSKASRLTKCD 1
            +P  TE  +SP Q P+SGK  K  + SR++KC+
Sbjct: 78  ASPGYTEVVSSPHQTPVSGKAGK-GRGSRISKCN 110


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