BLASTX nr result

ID: Glycyrrhiza23_contig00030083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030083
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [M...   244   5e-63
emb|CBI16338.3| unnamed protein product [Vitis vinifera]              180   1e-43
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...   168   4e-40
ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222...   161   6e-38
dbj|BAG70995.1| uncharacterized protein [Musa balbisiana] gi|199...   145   3e-33

>ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355500678|gb|AES81881.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1564

 Score =  244 bits (623), Expect = 5e-63
 Identities = 109/133 (81%), Positives = 123/133 (92%)
 Frame = -1

Query: 402 LLCCCGKECRRRYHPSCLDPPLNYIPPGFWHCIWCVKKKIRLGVHSVSEGVESILDSREV 223
           LL CCGK C+RRYHPSCLDP L ++P GFWHC+WCV+KKI+LGVHSVS+GVESILDSREV
Sbjct: 58  LLFCCGKGCQRRYHPSCLDPLLKFLPIGFWHCLWCVEKKIKLGVHSVSKGVESILDSREV 117

Query: 222 VSKDKVMQREYFVKYHGLAHAHNCWIPEKQMLLEAPKLLAKFKRKQQVIRWKKDWSIPHR 43
           VSKDKV+QREYFVKY  LAHAHNCWIPEKQML+EAPKLL K+K ++QV+RWKKDWSIPHR
Sbjct: 118 VSKDKVIQREYFVKYQDLAHAHNCWIPEKQMLIEAPKLLKKYKNRKQVVRWKKDWSIPHR 177

Query: 42  LLLKRAIILSKQN 4
           LLLKR IILSK+N
Sbjct: 178 LLLKREIILSKKN 190


>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/140 (61%), Positives = 105/140 (75%), Gaps = 6/140 (4%)
 Frame = -1

Query: 402 LLCCCGKECRRRYHPSCLDPPLNYIPPGFWHCIWCVKKKIRLGVHSVSEGVESILDSREV 223
           LLCC GK C+R YH +CLDPPL  IPPG WHC+ CVKKK  LGVH+VSEGVESI D+REV
Sbjct: 456 LLCCDGKGCKRSYHLACLDPPLGEIPPGIWHCMLCVKKKTELGVHAVSEGVESIWDTREV 515

Query: 222 ---VSKDKVMQREYFVKYHGLAHAHNCWIPEKQMLLEAPKLLAKFKRKQQV---IRWKKD 61
               ++    Q++YFVKY GLAH HN WIPE Q+LLEAP L+AKF RK QV     +K +
Sbjct: 516 ELPSAEGVQKQKQYFVKYKGLAHVHNHWIPESQLLLEAPSLVAKFNRKNQVKYFALYKLE 575

Query: 60  WSIPHRLLLKRAIILSKQND 1
           W++PHRLL KR ++ +KQ+D
Sbjct: 576 WTVPHRLLQKRLLMPTKQSD 595


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857313|gb|EEE94860.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2283

 Score =  168 bits (426), Expect = 4e-40
 Identities = 74/134 (55%), Positives = 101/134 (75%), Gaps = 3/134 (2%)
 Frame = -1

Query: 396 CCCGKECRRRYHPSCLDPPLNYIPPGFWHCIWCVKKKIRLGVHSVSEGVESILDSREV-V 220
           CC G+ C+R YH SCLDPPL  +P G WHC+ CV+KKI  G+HSVS+G+ESI D+ EV V
Sbjct: 376 CCDGQGCKRSYHLSCLDPPLGDVPLGVWHCLACVRKKIEFGMHSVSKGIESIWDASEVEV 435

Query: 219 SKDKVMQRE--YFVKYHGLAHAHNCWIPEKQMLLEAPKLLAKFKRKQQVIRWKKDWSIPH 46
           + D  +QR+  ++VKY GLAH HN W+PE Q++LEAP LLAKF +K QV +WK++W +PH
Sbjct: 436 ADDNGVQRQKQFYVKYKGLAHVHNRWLPENQLILEAPSLLAKFNQKNQVRKWKQEWIVPH 495

Query: 45  RLLLKRAIILSKQN 4
            +L KR+++   Q+
Sbjct: 496 HMLQKRSVMFPNQH 509


>ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222705 [Cucumis sativus]
          Length = 2887

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/134 (53%), Positives = 98/134 (73%), Gaps = 3/134 (2%)
 Frame = -1

Query: 402  LLCCCGKECRRRYHPSCLDPPLNYIPPGFWHCIWCVKKKIRLGVHSVSEGVESILDSREV 223
            LLCC GKECRR +H SCLDPPL  +P G WHC  C+++KI+ GV++VS+G ESI D+RE 
Sbjct: 649  LLCCEGKECRRSFHLSCLDPPLEDVPLGVWHCPMCIRRKIKFGVYAVSKGFESIWDTRET 708

Query: 222  VSKD---KVMQREYFVKYHGLAHAHNCWIPEKQMLLEAPKLLAKFKRKQQVIRWKKDWSI 52
               D      Q++YFVK+  LAHAHN W+PE ++LLEA  L+++F +K Q  RWK++W+I
Sbjct: 709  EISDADGSQRQKQYFVKFKDLAHAHNRWLPESKLLLEASSLVSRFIKKNQYSRWKEEWAI 768

Query: 51   PHRLLLKRAIILSK 10
            P RLL KR ++ +K
Sbjct: 769  PQRLLQKRLLLSAK 782


>dbj|BAG70995.1| uncharacterized protein [Musa balbisiana]
           gi|199601726|dbj|BAG70985.1| uncharacterized protein
           [Musa balbisiana]
          Length = 405

 Score =  145 bits (367), Expect = 3e-33
 Identities = 73/136 (53%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
 Frame = -1

Query: 399 LCCCGKECRRRYHPSCLDPPLNYIPPGFWHCIWCVKKKIRLGVHSVSEGVESILDSREVV 220
           L C GK C R YH SCLDPPL    PG W CI+C+K+KI  GV+SVSEG++SI + +E +
Sbjct: 176 LSCDGKGCNRSYHLSCLDPPLQDTLPGVWLCIFCIKRKIEFGVYSVSEGIDSIWNIKEGL 235

Query: 219 SKDKVMQREYFVKYHGLAHAHNCWIPEKQMLLEAPKLLAKFKRKQQV---IRWKKDWSIP 49
              K     Y VKY GLAH HN WI E QML EAP +L+KF  K Q+   IRWK++W+ P
Sbjct: 236 QTGK----RYLVKYKGLAHVHNQWISEIQMLQEAPTVLSKFSTKYQIERAIRWKQEWTEP 291

Query: 48  HRLLLKRAIILSKQND 1
           HRLL KR ++  K  D
Sbjct: 292 HRLLQKRLLMPRKLAD 307


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