BLASTX nr result

ID: Glycyrrhiza23_contig00030073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030073
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595543.1| Pentatricopeptide repeat-containing protein ...   174   9e-42
ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containi...   171   4e-41
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   146   2e-33
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26

>ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484591|gb|AES65794.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 958

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/104 (79%), Positives = 94/104 (90%)
 Frame = +2

Query: 5    FIEEAESLLENADCGQDRSSLWAVLLGACTKCSDHVTAERVAKRMIELDPDFHLSYVLLG 184
            FI+EAE LLENADC  D+S LWA LLGACTKCSD+ TAERVA++MIEL+PDFHLSYVLL 
Sbjct: 839  FIDEAECLLENADCRYDKS-LWAALLGACTKCSDYRTAERVARKMIELEPDFHLSYVLLN 897

Query: 185  NIYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDSENRKGSRFD 316
            NIYREVGRW+DALEIRKLMEDRGVKK+ GKSW+DS+NRKGS  +
Sbjct: 898  NIYREVGRWDDALEIRKLMEDRGVKKMAGKSWIDSQNRKGSHIN 941


>ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 611

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/102 (79%), Positives = 94/102 (92%)
 Frame = +2

Query: 2   EFIEEAESLLENADCGQDRSSLWAVLLGACTKCSDHVTAERVAKRMIELDPDFHLSYVLL 181
           E IEEAESLLE+ADC  D S  WAVLLGACTKCSD+VTAER+AK+MI+L+PDFHLSYVLL
Sbjct: 508 ELIEEAESLLESADCRYDHSR-WAVLLGACTKCSDYVTAERIAKKMIQLEPDFHLSYVLL 566

Query: 182 GNIYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDSENRKGS 307
           GNIYR VG+WN+ALEIRKLME+RGVKK+PGKSW++SE +KGS
Sbjct: 567 GNIYRAVGKWNEALEIRKLMEERGVKKVPGKSWIESEKQKGS 608


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/103 (64%), Positives = 87/103 (84%)
 Frame = +2

Query: 8   IEEAESLLENADCGQDRSSLWAVLLGACTKCSDHVTAERVAKRMIELDPDFHLSYVLLGN 187
           +EEAE L+E +D  +D SSLWA LLGACT C+++  AER+AKR++EL+PD+HLSYVLL N
Sbjct: 513 LEEAEILIETSDF-RDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLAN 571

Query: 188 IYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDSENRKGSRFD 316
           +Y+ VGRWNDAL IR+LM+DRGV K+PGKSW++++N  GS FD
Sbjct: 572 VYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGSSFD 614


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/103 (64%), Positives = 87/103 (84%)
 Frame = +2

Query: 8   IEEAESLLENADCGQDRSSLWAVLLGACTKCSDHVTAERVAKRMIELDPDFHLSYVLLGN 187
           +EEAE L+E +D  +D SSLWA LLGACT C+++  AER+AKR++EL+PD+HLSYVLL N
Sbjct: 572 LEEAEILIETSDF-RDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLAN 630

Query: 188 IYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDSENRKGSRFD 316
           +Y+ VGRWNDAL IR+LM+DRGV K+PGKSW++++N  GS FD
Sbjct: 631 VYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGSSFD 673


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/94 (59%), Positives = 72/94 (76%)
 Frame = +2

Query: 8   IEEAESLLENADCGQDRSSLWAVLLGACTKCSDHVTAERVAKRMIELDPDFHLSYVLLGN 187
           +EEAE+L+ENA+C +D  SLW VLLGAC       TAER+AK+ +EL PD HLSYV L N
Sbjct: 514 LEEAENLIENANC-RDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHLSYVYLAN 572

Query: 188 IYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDS 289
           +YR VGRW+DA++IR LM  RGV K+PG SW+++
Sbjct: 573 VYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWIET 606


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