BLASTX nr result

ID: Glycyrrhiza23_contig00030067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030067
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594217.1| hypothetical protein MTR_2g025700 [Medicago ...   113   2e-23
ref|XP_002308776.1| predicted protein [Populus trichocarpa] gi|2...    92   5e-17
emb|CAN77938.1| hypothetical protein VITISV_033631 [Vitis vinifera]    90   3e-16
gb|AAC17603.1| F12F1.6 [Arabidopsis thaliana]                          64   3e-08
ref|NP_001031027.1| uncharacterized protein [Arabidopsis thalian...    64   3e-08

>ref|XP_003594217.1| hypothetical protein MTR_2g025700 [Medicago truncatula]
           gi|87241148|gb|ABD33006.1| TNFR/CD27/30/40/95
           cysteine-rich region [Medicago truncatula]
           gi|355483265|gb|AES64468.1| hypothetical protein
           MTR_2g025700 [Medicago truncatula]
          Length = 103

 Score =  113 bits (283), Expect = 2e-23
 Identities = 50/70 (71%), Positives = 57/70 (81%), Gaps = 2/70 (2%)
 Frame = +1

Query: 1   LASPILG--CPPTDGRGCKDCIVNQMKRSCPSCMPPLHCMARCLWDGGSRPNCINKCNCN 174
           +ASPI+G  CP T+ R CKDCIVNQMK+SCP+C P LHCMARCLWDGG + NCINKCNC 
Sbjct: 22  MASPIMGWGCPRTNRRWCKDCIVNQMKKSCPTCYPVLHCMARCLWDGGFKTNCINKCNCY 81

Query: 175 NTGCYPTLSD 204
           +  CYPTL D
Sbjct: 82  S--CYPTLYD 89


>ref|XP_002308776.1| predicted protein [Populus trichocarpa] gi|222854752|gb|EEE92299.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 38/62 (61%), Positives = 47/62 (75%)
 Frame = +1

Query: 19  GCPPTDGRGCKDCIVNQMKRSCPSCMPPLHCMARCLWDGGSRPNCINKCNCNNTGCYPTL 198
           G  P+DG GCKDC+++QMK  CP+C+P LHCMARCLW G SR  CI +C+C+  G  PTL
Sbjct: 42  GTKPSDGSGCKDCVLDQMKYGCPTCVPILHCMARCLWGGSSRSKCITRCDCD--GGKPTL 99

Query: 199 SD 204
           SD
Sbjct: 100 SD 101


>emb|CAN77938.1| hypothetical protein VITISV_033631 [Vitis vinifera]
          Length = 92

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 40/68 (58%), Positives = 47/68 (69%)
 Frame = +1

Query: 1   LASPILGCPPTDGRGCKDCIVNQMKRSCPSCMPPLHCMARCLWDGGSRPNCINKCNCNNT 180
           + SP LGCP +DG  CKDCIVNQM+  CPSC P L CMARCLW G S+  C+ +C+C   
Sbjct: 14  MISPALGCP-SDGSECKDCIVNQMRNGCPSCAPVLXCMARCLWGGXSKSKCVKRCDC--Y 70

Query: 181 GCYPTLSD 204
           G  P LSD
Sbjct: 71  GGKPRLSD 78


>gb|AAC17603.1| F12F1.6 [Arabidopsis thaliana]
          Length = 159

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 26/57 (45%), Positives = 32/57 (56%)
 Frame = +1

Query: 28  PTDGRGCKDCIVNQMKRSCPSCMPPLHCMARCLWDGGSRPNCINKCNCNNTGCYPTL 198
           P     CK C+  QMK  CP C+P L CMARCLW G ++  C   C C +T   P+L
Sbjct: 38  PPSQNSCKTCMAEQMKYDCPKCVPVLRCMARCLWGGVTQRKCTTTCRC-DTAAKPSL 93


>ref|NP_001031027.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98961977|gb|ABF59318.1| unknown protein [Arabidopsis
           thaliana] gi|332190711|gb|AEE28832.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 109

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 26/57 (45%), Positives = 32/57 (56%)
 Frame = +1

Query: 28  PTDGRGCKDCIVNQMKRSCPSCMPPLHCMARCLWDGGSRPNCINKCNCNNTGCYPTL 198
           P     CK C+  QMK  CP C+P L CMARCLW G ++  C   C C +T   P+L
Sbjct: 38  PPSQNSCKTCMAEQMKYDCPKCVPVLRCMARCLWGGVTQRKCTTTCRC-DTAAKPSL 93


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