BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030062
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601393.1| Pentatricopeptide repeat-containing protein ...   244   2e-62
ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containi...   234   1e-59
ref|XP_002530005.1| pentatricopeptide repeat-containing protein,...   164   3e-38
emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]   157   2e-36
ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containi...   155   7e-36

>ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|358344321|ref|XP_003636238.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355490441|gb|AES71644.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502173|gb|AES83376.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 486

 Score =  244 bits (622), Expect = 2e-62
 Identities = 122/158 (77%), Positives = 127/158 (80%)
 Frame = -2

Query: 477 MGSVTVASTLVHMAERCSCMPELKLIHAHAFRTCLHQHTVVLGKLFRFAAVSPFGDLHYA 298
           M S  VAS LV+MAE+C  M   KLIHAHAFRTCLHQH VVLGKLFRFAAVSPFGDL YA
Sbjct: 1   MASANVASALVYMAEKCISMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYA 60

Query: 297 HRMFDQMPHPTTFFYNTLIRAXXXXXXXXXXXXLFFNRMRQNGVAPDEFSFTFLLKSRSS 118
           H MFDQMP PTTFFYNTLIRA            LFFNRMR+N +APDEFSFTFLLKSRS 
Sbjct: 61  HNMFDQMPQPTTFFYNTLIRA-HSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKSRSF 119

Query: 117 TTPLFHDTHGAVFKFGFCRHLHVLNALIHLYAVGGVTL 4
           T PL HD HGAVFKFGFCRHLHV NALIHLYAVGGVT+
Sbjct: 120 TMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTI 157


>ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 488

 Score =  234 bits (598), Expect = 1e-59
 Identities = 119/161 (73%), Positives = 125/161 (77%), Gaps = 2/161 (1%)
 Frame = -2

Query: 477 MGSVTVASTLVHMAERCSCMPELKLIHAHAFRTCLHQHTVVLGKLFRFAAVSPFGDLHYA 298
           MG+ TVA TL HMAERC+CM +LKL+HAHAFRT LH HTVVLGKLFRFAAVSP GDL YA
Sbjct: 1   MGTTTVAFTLAHMAERCTCMRDLKLLHAHAFRTRLHDHTVVLGKLFRFAAVSPLGDLRYA 60

Query: 297 HRMFDQMPHPTTFFYNTLIRAXXXXXXXXXXXXLFFNRMRQNGVAPDEFSFTFLLKSRSS 118
           HRMFDQMPHPTTFFYNTLIRA              FN MRQN VAPD+FSF FLLKSRS 
Sbjct: 61  HRMFDQMPHPTTFFYNTLIRAHAHSTTPSLSSLS-FNLMRQNNVAPDQFSFNFLLKSRSR 119

Query: 117 TTPLFH--DTHGAVFKFGFCRHLHVLNALIHLYAVGGVTLL 1
           TTPL H  D HGAV KFGFCRHLHV N LIH YA  G+TLL
Sbjct: 120 TTPLTHHNDVHGAVLKFGFCRHLHVQNGLIHFYANRGMTLL 160


>ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530484|gb|EEF32367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 499

 Score =  164 bits (414), Expect = 3e-38
 Identities = 86/160 (53%), Positives = 104/160 (65%), Gaps = 8/160 (5%)
 Frame = -2

Query: 468 VTVASTLVHMAERCSCMPELKLIHAHAFRTCLHQHTVVLGKLFRFAAVSPFGDLHYAHRM 289
           + +AS L  +AE C  M  LK IHAH+  T LH H+V+LGK+ RFAAVSP GDL YA R+
Sbjct: 13  LALASILASIAENCQSMNHLKQIHAHSLLTDLHNHSVILGKMLRFAAVSPSGDLPYAQRL 72

Query: 288 FDQMPHPTTFFYNTLIRAXXXXXXXXXXXXLFFNRMRQNGVAPDEFSFTFLLKSRSSTTP 109
           FDQMP P TFFYNT+IR               FN+MRQN V PDEF+F FL+K+RS    
Sbjct: 73  FDQMPQPNTFFYNTIIRG-YAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHK 131

Query: 108 LFH--------DTHGAVFKFGFCRHLHVLNALIHLYAVGG 13
           + +        + HGAVFK+GFC HL V NALI+LYAV G
Sbjct: 132 VHNFPSTLECDEIHGAVFKYGFCSHLFVQNALINLYAVKG 171


>emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
          Length = 722

 Score =  157 bits (397), Expect = 2e-36
 Identities = 88/163 (53%), Positives = 101/163 (61%), Gaps = 6/163 (3%)
 Frame = -2

Query: 480 IMGSVTVASTLVHMAERCSCMPELKLIHAHAFRTCLHQHTVVLGKLFRFAAVSPFGDLHY 301
           +M  +  + +L  MAE C  M  LKLIHA AFR  LH H +VL K+FRFAAVSP G LHY
Sbjct: 234 VMHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHY 293

Query: 300 AHRMFDQMPHPTTFFYNTLIRAXXXXXXXXXXXXLFFNRMRQNGVAPDEFSFTFLLKSRS 121
           A R+F Q+  P TFFYNTLIR               FN+MR+N V PD F+FTFLLK RS
Sbjct: 294 ADRLFSQIHQPNTFFYNTLIRG-YSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRS 352

Query: 120 S---TTPLF---HDTHGAVFKFGFCRHLHVLNALIHLYAVGGV 10
                 PL     + HGAV K GFC HL V+NALIHLYA  GV
Sbjct: 353 RMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGV 395



 Score =  122 bits (307), Expect = 6e-26
 Identities = 73/159 (45%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
 Frame = -2

Query: 480 IMGSVTVASTLVHMAERCSCMPELKLIHAHAFRTCLHQHTVVLGKLFRFAAVSPFGDLHY 301
           +M  +  + +L  MAE C  M  LKLIHA AFR  LH H +VL K+FRFAAVSP G LHY
Sbjct: 80  VMHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHY 139

Query: 300 AHRMFDQMPHPTTFFYNTLIRAXXXXXXXXXXXXLFFNRMRQNGVAPDEFSFTFLLKSRS 121
           A R+F Q+  P TFFYNTLIR               FN+MR+N V PD F+FTFLLK RS
Sbjct: 140 ADRLFSQIHQPNTFFYNTLIRG-YSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRS 198

Query: 120 S---TTPLF---HDTHGAVFKFGFCRHL--HVLNALIHL 28
                 PL     + HGA   +   + L  ++ N ++H+
Sbjct: 199 RMRIDLPLIVASDEIHGAGVDYDKYKTLKSYISNKVMHM 237


>ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 663

 Score =  155 bits (393), Expect = 7e-36
 Identities = 88/163 (53%), Positives = 101/163 (61%), Gaps = 6/163 (3%)
 Frame = -2

Query: 480 IMGSVTVASTLVHMAERCSCMPELKLIHAHAFRTCLHQHTVVLGKLFRFAAVSPFGDLHY 301
           +M  +  + +L  MAE C  M  LKLIHA AFR  LH H +VL K+FRFAAVSP G LHY
Sbjct: 175 VMHMLPTSQSLASMAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHY 234

Query: 300 AHRMFDQMPHPTTFFYNTLIRAXXXXXXXXXXXXLFFNRMRQNGVAPDEFSFTFLLKSRS 121
           A R+F Q+  P TFFYNTLIR               FN+MR+N V PD F+FTFLLK RS
Sbjct: 235 ADRLFSQIHQPNTFFYNTLIRG-YSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRS 293

Query: 120 S---TTPLF---HDTHGAVFKFGFCRHLHVLNALIHLYAVGGV 10
                 PL     + HGAV K GFC HL V+NALIHLYA  GV
Sbjct: 294 RMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGV 336