BLASTX nr result

ID: Glycyrrhiza23_contig00030061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030061
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517139.1| PREDICTED: G2/mitotic-specific cyclin-1-like...   123   1e-26
ref|XP_003537680.1| PREDICTED: G2/mitotic-specific cyclin-1-like...   122   2e-26
sp|P46277.1|CCNB1_MEDVA RecName: Full=G2/mitotic-specific cyclin...   114   1e-23
sp|P30286.1|CCNB1_MEDSA RecName: Full=G2/mitotic-specific cyclin...   112   2e-23
emb|CAA55272.1| B-like cyclin [Medicago sativa subsp. x varia]        112   3e-23

>ref|XP_003517139.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Glycine max]
          Length = 432

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/83 (73%), Positives = 72/83 (86%), Gaps = 1/83 (1%)
 Frame = +3

Query: 33  MVVSEEKSSNSIHPRNVQGGGVECMGTRKVGQNRRALSVINQNLV-EGRPYPCVVNKRPL 209
           M +S+E SS  I+P + QGG +EC+G RK+GQNRRALSVINQ+LV EGRPYPCVVNKR L
Sbjct: 1   MKISDENSSKPINPTSFQGG-IECVGNRKMGQNRRALSVINQDLVAEGRPYPCVVNKRAL 59

Query: 210 SEKNEVCEKKQADPVHRPITRRF 278
           +EK++VCEKKQADP HRPITRRF
Sbjct: 60  AEKHDVCEKKQADPGHRPITRRF 82


>ref|XP_003537680.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Glycine max]
          Length = 433

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
 Frame = +3

Query: 33  MVVSEEKSSNSIHPRNVQGGGVECMGTRKVGQNRRALSVINQNLV-EGRPYPCVVNKRPL 209
           M +S+E SS  I+P + QGG +EC+G RK+GQNRRALSVINQ+LV EGRPYPCVVNKR L
Sbjct: 1   MKISDENSSKPINPTSFQGG-IECVGNRKMGQNRRALSVINQDLVAEGRPYPCVVNKRAL 59

Query: 210 SEKNEVCEKKQADPVHRPITRRF 278
           +EK+ VCEKKQADP HRPITRRF
Sbjct: 60  AEKHNVCEKKQADPGHRPITRRF 82


>sp|P46277.1|CCNB1_MEDVA RecName: Full=G2/mitotic-specific cyclin-1; AltName: Full=B-like
           cyclin; AltName: Full=CycMs1 gi|914861|emb|CAA57559.1|
           cycMs1 [Medicago sativa subsp. x varia]
          Length = 428

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
 Frame = +3

Query: 33  MVVSEEKSSNSIHPRNVQGGGVECMGTRKVGQNRRALSVINQNLV-EGRPYPCVVNKRPL 209
           M  SEEK+ ++ +P N +GG    + +RKVGQNRRAL VINQNLV EGRPYPCVVNKR L
Sbjct: 1   MKFSEEKNVSN-NPTNFEGG----LDSRKVGQNRRALGVINQNLVVEGRPYPCVVNKRAL 55

Query: 210 SEKNEVCEKKQADPVHRPITRRF 278
           SE+N+VCEKKQADPVHRPITRRF
Sbjct: 56  SERNDVCEKKQADPVHRPITRRF 78


>sp|P30286.1|CCNB1_MEDSA RecName: Full=G2/mitotic-specific cyclin-1; AltName: Full=B-like
           cyclin; AltName: Full=CycMs1 gi|19597|emb|CAA48674.1|
           cyclin [Medicago sativa]
          Length = 213

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/83 (71%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
 Frame = +3

Query: 33  MVVSEEKSSNSIHPRNVQGGGVECMGTRKVGQNRRALSVINQNLV-EGRPYPCVVNKRPL 209
           M  SEEK+ ++ +P N +GG    + +RKVG+NRRAL VINQNLV EGRPYPCVVNKR L
Sbjct: 1   MKFSEEKNVSN-NPTNFEGG----LDSRKVGENRRALGVINQNLVVEGRPYPCVVNKRAL 55

Query: 210 SEKNEVCEKKQADPVHRPITRRF 278
           SE+N+VCEKKQADPVHRPITRRF
Sbjct: 56  SERNDVCEKKQADPVHRPITRRF 78


>emb|CAA55272.1| B-like cyclin [Medicago sativa subsp. x varia]
          Length = 428

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/78 (73%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
 Frame = +3

Query: 48  EKSSNSIHPRNVQGGGVECMGTRKVGQNRRALSVINQNLV-EGRPYPCVVNKRPLSEKNE 224
           E+++ S +P N +GG    + +RKVGQNRRAL VINQNLV EGRPYPCVVNKR LSE+N+
Sbjct: 5   EENNVSNNPTNFEGG----LDSRKVGQNRRALGVINQNLVVEGRPYPCVVNKRALSERND 60

Query: 225 VCEKKQADPVHRPITRRF 278
           VCEKKQADPVHRPITRRF
Sbjct: 61  VCEKKQADPVHRPITRRF 78


Top