BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030052
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   464   e-128
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   460   e-127
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   401   e-109
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   396   e-108
ref|XP_002318462.1| predicted protein [Populus trichocarpa] gi|2...   396   e-108

>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score =  464 bits (1193), Expect = e-128
 Identities = 242/262 (92%), Positives = 245/262 (93%)
 Frame = -1

Query: 788  LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGAN 609
            LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVI AN
Sbjct: 264  LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVISAN 323

Query: 608  TIHYHSQSASCALALNSYAVSLDSSQEMPRSSFNVELDAANATWLLSDVAXXXXXXXXXX 429
            TIHYHSQSASCALALNSYAV+LDSSQE+PRSSFNVELDAANATWLLSDVA          
Sbjct: 324  TIHYHSQSASCALALNSYAVTLDSSQEIPRSSFNVELDAANATWLLSDVALLSTKTGELL 383

Query: 428  XXXLIYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSTLS 249
               L+YDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVS LS
Sbjct: 384  LLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMLS 443

Query: 248  SNLKEEVGDIEVDAPSPKRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQKSFSFAVRD 69
            SNLKEEVGDIE DAPS KRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQKSFSFAVRD
Sbjct: 444  SNLKEEVGDIEADAPS-KRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQKSFSFAVRD 502

Query: 68   SLINVGPLKDFSYGLRINADAN 3
            SLINVGPLKDFSYGLRINADAN
Sbjct: 503  SLINVGPLKDFSYGLRINADAN 524


>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1449

 Score =  460 bits (1184), Expect = e-127
 Identities = 240/262 (91%), Positives = 245/262 (93%)
 Frame = -1

Query: 788  LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGAN 609
            LTWAGRVSW HHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGAN
Sbjct: 266  LTWAGRVSWTHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGAN 325

Query: 608  TIHYHSQSASCALALNSYAVSLDSSQEMPRSSFNVELDAANATWLLSDVAXXXXXXXXXX 429
            TIHYHSQSASCALALN+YAV+LDSSQE+PRSSFNVELDAANATWLLSDVA          
Sbjct: 326  TIHYHSQSASCALALNNYAVTLDSSQEIPRSSFNVELDAANATWLLSDVALLSTKTGELL 385

Query: 428  XXXLIYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSTLS 249
               L+YDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVS +S
Sbjct: 386  LLMLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMMS 445

Query: 248  SNLKEEVGDIEVDAPSPKRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQKSFSFAVRD 69
            SNLKEEVGDIEVDAPS KRLRRSPSDALQDMVSGEELSLYGSA NRTESAQKSFSFAVRD
Sbjct: 446  SNLKEEVGDIEVDAPS-KRLRRSPSDALQDMVSGEELSLYGSATNRTESAQKSFSFAVRD 504

Query: 68   SLINVGPLKDFSYGLRINADAN 3
            SLINVGPLKDFSYGLRINADAN
Sbjct: 505  SLINVGPLKDFSYGLRINADAN 526


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score =  401 bits (1030), Expect = e-109
 Identities = 207/260 (79%), Positives = 226/260 (86%)
 Frame = -1

Query: 788  LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGAN 609
            LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLL VPSPIGGV+VI AN
Sbjct: 268  LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLPVPSPIGGVVVISAN 327

Query: 608  TIHYHSQSASCALALNSYAVSLDSSQEMPRSSFNVELDAANATWLLSDVAXXXXXXXXXX 429
            +IHYHSQSASCALALN+YAVS D+SQEMPRSSF+VELDAANATWL +DVA          
Sbjct: 328  SIHYHSQSASCALALNNYAVSADNSQEMPRSSFSVELDAANATWLSNDVAMLSTKTGELL 387

Query: 428  XXXLIYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSTLS 249
               L YDGRVV RLDLSKS+ASVL+SGI  IGNSLFFL SRLGDS+LVQF+     S LS
Sbjct: 388  LLTLAYDGRVVHRLDLSKSRASVLTSGIAAIGNSLFFLGSRLGDSLLVQFT-----SILS 442

Query: 248  SNLKEEVGDIEVDAPSPKRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQKSFSFAVRD 69
            S++KEEVGDIE D PS KRLR+S SDALQDMV+GEELSLYGSAPN TE++QK+FSF+VRD
Sbjct: 443  SSVKEEVGDIEGDVPSAKRLRKSSSDALQDMVNGEELSLYGSAPNSTETSQKTFSFSVRD 502

Query: 68   SLINVGPLKDFSYGLRINAD 9
            S INVGPLKDF+YGLRINAD
Sbjct: 503  SFINVGPLKDFAYGLRINAD 522


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
            and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score =  396 bits (1018), Expect = e-108
 Identities = 207/262 (79%), Positives = 223/262 (85%)
 Frame = -1

Query: 788  LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGAN 609
            LTWAGRVSWKHHTCMISALSISTTLKQ  LIWS VNLPHDAYKLLAVP PIGGVLVI AN
Sbjct: 269  LTWAGRVSWKHHTCMISALSISTTLKQPTLIWSVVNLPHDAYKLLAVPPPIGGVLVICAN 328

Query: 608  TIHYHSQSASCALALNSYAVSLDSSQEMPRSSFNVELDAANATWLLSDVAXXXXXXXXXX 429
            TIHYHS+SA+ ALALN+YAVS+DSSQE+PR+SF+VELDA  A WLL+DVA          
Sbjct: 329  TIHYHSESATYALALNNYAVSIDSSQELPRASFSVELDAVKAAWLLNDVALLSAKNGELL 388

Query: 428  XXXLIYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSTLS 249
               L+YDGRVVQRLDLSKSKASVL+S ITTIGNSLFFL SRLGDS+LVQF+ G G S +S
Sbjct: 389  LLSLVYDGRVVQRLDLSKSKASVLTSDITTIGNSLFFLGSRLGDSLLVQFTNGLGPSVVS 448

Query: 248  SNLKEEVGDIEVDAPSPKRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQKSFSFAVRD 69
            S LKEEVG+IE D PS KRL+RS SD LQDMVSGEELSLYGS  N TESAQKSFSFAVRD
Sbjct: 449  SGLKEEVGEIEGDVPSAKRLKRSASDGLQDMVSGEELSLYGSTANNTESAQKSFSFAVRD 508

Query: 68   SLINVGPLKDFSYGLRINADAN 3
            SLINVGPLKDFSYGLR N DA+
Sbjct: 509  SLINVGPLKDFSYGLRSNYDAS 530


>ref|XP_002318462.1| predicted protein [Populus trichocarpa] gi|222859135|gb|EEE96682.1|
            predicted protein [Populus trichocarpa]
          Length = 1455

 Score =  396 bits (1018), Expect = e-108
 Identities = 208/267 (77%), Positives = 223/267 (83%), Gaps = 5/267 (1%)
 Frame = -1

Query: 788  LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGAN 609
            LTWAGRV WKHHTCMISALSISTTLKQ  LIWS  NLPHDAYKLLAVPSPIGGVLVIG N
Sbjct: 268  LTWAGRVVWKHHTCMISALSISTTLKQPTLIWSIGNLPHDAYKLLAVPSPIGGVLVIGVN 327

Query: 608  TIHYHSQSASCALALNSYAVSLDSSQEMPRSSFNVELDAANATWLLSDVAXXXXXXXXXX 429
            TIHYHS+SASCALALNSYA S+DSSQE+PR++F+VELDAANATWLL DVA          
Sbjct: 328  TIHYHSESASCALALNSYAASVDSSQELPRATFSVELDAANATWLLKDVALLSTKTGELL 387

Query: 428  XXXLIYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSTLS 249
               L+YDGRVVQRLDLSKSKASVL+S ITT+GNS FFL SRLGDS+LVQF+ G G S LS
Sbjct: 388  LLTLVYDGRVVQRLDLSKSKASVLTSDITTLGNSFFFLGSRLGDSLLVQFTSGLGSSMLS 447

Query: 248  SNLKEEVGDIEVDAPSPKRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQ-----KSFS 84
              LKEEVGDIE D PS KRL+ S SDALQDMVSGEELSLY SAPN  ES+Q     K+FS
Sbjct: 448  PGLKEEVGDIEGDLPSAKRLKVSSSDALQDMVSGEELSLYSSAPNNAESSQVVSVIKTFS 507

Query: 83   FAVRDSLINVGPLKDFSYGLRINADAN 3
            F VRDSLINVGPLKDF+YGLRINADAN
Sbjct: 508  FTVRDSLINVGPLKDFAYGLRINADAN 534