BLASTX nr result

ID: Glycyrrhiza23_contig00030048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030048
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636787.1| TdcA1-ORF2 protein [Medicago truncatula] gi|...   104   8e-21
ref|XP_003618629.1| TdcA1-ORF2 protein [Medicago truncatula] gi|...   103   1e-20
gb|AAF79374.1|AC007887_33 F15O4.30 [Arabidopsis thaliana]              78   6e-13
gb|AAG50553.1|AC074228_8 En/Spm-like transposon protein, putativ...    77   1e-12
gb|AAF06087.1|AC007918_11 Similar to gi|4325351 T25H8.2 TNP2 pro...    73   2e-11

>ref|XP_003636787.1| TdcA1-ORF2 protein [Medicago truncatula]
           gi|355502722|gb|AES83925.1| TdcA1-ORF2 protein [Medicago
           truncatula]
          Length = 430

 Score =  104 bits (259), Expect = 8e-21
 Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = +3

Query: 3   SVLNKSGRPSGKAQTFWLSND-EWKYAHVQVLINSNEVKPYLDTFLQYHS-VNDQDGFNR 176
           SV N  GR +GK   +W+ +  E + AHV VLIN  EVKPYL+ F+ +++   +      
Sbjct: 161 SVFNLDGRHAGKVLQYWMVDQKEMRSAHVHVLINCAEVKPYLEEFIAFYAEFGEGSTVGS 220

Query: 177 ILAEFPALFKGYVHDERHGITNTDIKALAWGPKLEATSWPMYFVNGYMFHTKASSDGKKT 356
           I   FPA FK  V++         ++ L+ GP   A  +  YFVNGY FHT + ++GKKT
Sbjct: 221 IHEYFPAWFKQRVYNAEPTDEVIRLRQLSQGPLQCANEFHTYFVNGYKFHTHSWTEGKKT 280

Query: 357 TNCGVHVKRPTKGGENDFY 413
            N GV+VK  T GGE+DFY
Sbjct: 281 INSGVYVKGVTDGGEDDFY 299


>ref|XP_003618629.1| TdcA1-ORF2 protein [Medicago truncatula]
           gi|355493644|gb|AES74847.1| TdcA1-ORF2 protein [Medicago
           truncatula]
          Length = 578

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/139 (42%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
 Frame = +3

Query: 3   SVLNKSGRPSGKAQTFWLSND-EWKYAHVQVLINSNEVKPYLDTFLQYHSVNDQDGFNRI 179
           SV N  GR +GK   +W+ +  E + AHV VLIN  EVKPYL+ F+ +++   +      
Sbjct: 261 SVFNLHGRHAGKVLQYWMVDQKEMRSAHVHVLINCAEVKPYLEEFIAFYAEFGEGSTAGS 320

Query: 180 LAE-FPALFKGYVHDERHGITNTDIKALAWGPKLEATSWPMYFVNGYMFHTKASSDGKKT 356
           + E FPA FK  V++         ++ L+ GP   A  +  YFVNGY FHT + ++GKKT
Sbjct: 321 IHEYFPAWFKQRVYNAEPTDEVIRLRQLSQGPLQCANEFHTYFVNGYKFHTHSWTEGKKT 380

Query: 357 TNCGVHVKRPTKGGENDFY 413
            N GV+VK  T GGE+DFY
Sbjct: 381 INSGVYVKGVTDGGEDDFY 399


>gb|AAF79374.1|AC007887_33 F15O4.30 [Arabidopsis thaliana]
          Length = 1180

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
 Frame = +3

Query: 3    SVLNKSGRPSGKAQTFWLSNDEWKYAHVQVLINSNEVKPYLDTFLQYHSVNDQDGFNRIL 182
            ++  + GRPSG     WLS  +++ AH  VL N +  + YL    +Y S+++++ + R  
Sbjct: 877  NIFMQVGRPSGAMHVEWLSEKDYQNAHAYVLRNYSMFEDYLSA--KYPSLSEKELYVRRA 934

Query: 183  AEFPALFKGYV-HDERHGITNTDIKALAWGPKLEATSWPMYFVNGYMFHTKASSDGKKTT 359
             E+    K YV +   +    T ++ +  GP  +  +WPMYF  GY+FHT+    G+KT 
Sbjct: 935  EEYHLWVKEYVTYWNTNSPFPTWVQEIVQGPLNKVKTWPMYFTRGYLFHTQTHGAGRKTC 994

Query: 360  NCGVHVKRPT---KGGENDFY 413
            N GV VK         E DFY
Sbjct: 995  NYGVCVKGENYADSSDEADFY 1015


>gb|AAG50553.1|AC074228_8 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1074

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
 Frame = +3

Query: 21   GRPSGKAQTFWLSNDEWKYAHVQVLINSNEVKPYLDTF-----LQYHSVNDQDGFNRILA 185
            GRPSG+    WLS  +++ AH  VL N +  KP+   F      +Y  +++++ + R   
Sbjct: 771  GRPSGEMHVEWLSEKDYQSAHAYVLRNCDYFKPFESMFEDCLTAKYPCLSEKELYARRAE 830

Query: 186  EFPALFKGYV-HDERHGITNTDIKALAWGPKLEATSWPMYFVNGYMFHTKASSDGKKTTN 362
            E+    K YV +        T ++ +  GP  +  +WPMYF  GYMFHT+    G+KT N
Sbjct: 831  EYHLWVKEYVTYWNTTSPFPTWVQEIVQGPLNKVKTWPMYFTRGYMFHTQNHGAGRKTCN 890

Query: 363  CGVHVKRPT---KGGENDFY 413
             GV VK         E DFY
Sbjct: 891  YGVCVKGENYADSSDEADFY 910


>gb|AAF06087.1|AC007918_11 Similar to gi|4325351 T25H8.2 TNP2 protein homolog from Arabidopsis
            thaliana BAC gb|AF128394 [Arabidopsis thaliana]
          Length = 1121

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
 Frame = +3

Query: 21   GRPSGKAQTFWLSNDEWKYAHVQVLINSNEVKPYLDTFLQYHSVN-----DQDGFNRILA 185
            GRPSG+    WL   +++ AH  VL N +  KP+   F  Y S       +++ + R   
Sbjct: 817  GRPSGEMHVDWLLEKDYQSAHAYVLRNCDYFKPFESMFEDYLSAKYPCLPEKELYARRAE 876

Query: 186  EFPALFKGYV-HDERHGITNTDIKALAWGPKLEATSWPMYFVNGYMFHTKASSDGKKTTN 362
            E+    K YV +        T ++ +  GP  +  +WPMYF  GY+FHT+    G+KT N
Sbjct: 877  EYHLWVKEYVTYWNTTSPFPTWVQEIVQGPLNKVKTWPMYFTRGYLFHTQNHGAGRKTCN 936

Query: 363  CGVHVKRPT---KGGENDFY 413
             G+ VK         E DFY
Sbjct: 937  YGICVKGENYADSSDEADFY 956


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