BLASTX nr result

ID: Glycyrrhiza23_contig00030040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030040
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591551.1| DNA mismatch repair protein [Medicago trunca...   194   8e-48
ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2...   179   2e-43
ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2...   179   2e-43
emb|CBI36837.3| unnamed protein product [Vitis vinifera]              176   1e-42
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   176   1e-42

>ref|XP_003591551.1| DNA mismatch repair protein [Medicago truncatula]
            gi|355480599|gb|AES61802.1| DNA mismatch repair protein
            [Medicago truncatula]
          Length = 933

 Score =  194 bits (492), Expect = 8e-48
 Identities = 97/103 (94%), Positives = 102/103 (99%)
 Frame = -3

Query: 309  SQPEVEQQKERVLAAASTELERLFKKEDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 130
            SQP++EQQKERVLAAA+TELERLFKKE FSRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD
Sbjct: 694  SQPDIEQQKERVLAAAATELERLFKKEYFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 753

Query: 129  EKYNFECLSQSTILNQQPLIRPIRLELSPEEEIVASMHMDIIR 1
            EKYNFECLSQSTILNQQPL+RPIRLELSPEEEIVAS+HMDIIR
Sbjct: 754  EKYNFECLSQSTILNQQPLLRPIRLELSPEEEIVASIHMDIIR 796


>ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 944

 Score =  179 bits (455), Expect = 2e-43
 Identities = 91/103 (88%), Positives = 97/103 (94%)
 Frame = -3

Query: 309  SQPEVEQQKERVLAAASTELERLFKKEDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 130
            S+ E+ +QKER LAAA+TELER FKKEDFSRMKVIGQFNLGFII KLDQDLFIVDQHAAD
Sbjct: 705  SRSEIAEQKERALAAAATELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQHAAD 764

Query: 129  EKYNFECLSQSTILNQQPLIRPIRLELSPEEEIVASMHMDIIR 1
            EKYNFE LSQSTILNQQPL+RPI+LELSPEEEIVASMHMDIIR
Sbjct: 765  EKYNFERLSQSTILNQQPLLRPIKLELSPEEEIVASMHMDIIR 807


>ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 1036

 Score =  179 bits (454), Expect = 2e-43
 Identities = 91/102 (89%), Positives = 96/102 (94%)
 Frame = -3

Query: 306  QPEVEQQKERVLAAASTELERLFKKEDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAADE 127
            Q E+ +QKER LAAA+TELER FKKEDFSRMKVIGQFNLGFII KLDQDLFIVDQHAADE
Sbjct: 708  QSEIGEQKERALAAAATELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQHAADE 767

Query: 126  KYNFECLSQSTILNQQPLIRPIRLELSPEEEIVASMHMDIIR 1
            KYNFE LSQSTILNQQPL+RPI+LELSPEEEIVASMHMDIIR
Sbjct: 768  KYNFERLSQSTILNQQPLLRPIKLELSPEEEIVASMHMDIIR 809


>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/103 (82%), Positives = 98/103 (95%)
 Frame = -3

Query: 309 SQPEVEQQKERVLAAASTELERLFKKEDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 130
           SQPE E++K R LAAA+TELE+LFKK+DF RMKVIGQFNLGFIIGKLDQDLFIVDQHAAD
Sbjct: 604 SQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 663

Query: 129 EKYNFECLSQSTILNQQPLIRPIRLELSPEEEIVASMHMDIIR 1
           EKYNFE L+QST+LNQQPL+RP+RL+LSPEEE++AS+HMDIIR
Sbjct: 664 EKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMDIIR 706


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/103 (82%), Positives = 98/103 (95%)
 Frame = -3

Query: 309 SQPEVEQQKERVLAAASTELERLFKKEDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 130
           SQPE E++K R LAAA+TELE+LFKK+DF RMKVIGQFNLGFIIGKLDQDLFIVDQHAAD
Sbjct: 687 SQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 746

Query: 129 EKYNFECLSQSTILNQQPLIRPIRLELSPEEEIVASMHMDIIR 1
           EKYNFE L+QST+LNQQPL+RP+RL+LSPEEE++AS+HMDIIR
Sbjct: 747 EKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMDIIR 789


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