BLASTX nr result

ID: Glycyrrhiza23_contig00030024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030024
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein ...   182   3e-44
ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago t...   179   3e-43
ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein ...   154   9e-36
ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [...   152   2e-35
ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ...   145   3e-33

>ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 137

 Score =  182 bits (461), Expect = 3e-44
 Identities = 94/119 (78%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
 Frame = +3

Query: 9   PAPQWRFYXXXXXXXXXXXNKLFVGGLSWSADEKSLKDAFSSFGHVTEVRIVYDKDSGRS 188
           P  Q RFY           NKLFVGGLSWS D KSLK+AFSSFG VTEV IVYDKDSGRS
Sbjct: 21  PQTQCRFYCSPPSHASS--NKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRS 78

Query: 189 RGFGFVIFTNEDEAKCAKDAMDGKALLGRPLRINFALEKTRGVP-VVPRLSDMGHLNRH 362
           RGFGFVIF+NED+AKCAKDAMDGKALLGRPLRINFALEK RGVP VVPRLSD+GH+NRH
Sbjct: 79  RGFGFVIFSNEDDAKCAKDAMDGKALLGRPLRINFALEKARGVPVVVPRLSDIGHVNRH 137


>ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
           gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding
           protein [Medicago truncatula]
          Length = 135

 Score =  179 bits (453), Expect = 3e-43
 Identities = 92/121 (76%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   PSPAPQWRFYXXXXXXXXXXXNKLFVGGLSWSADEKSLKDAFSSFGHVTEVRIVYDKDSG 182
           PS  PQ+RF+           NKLFVGGLSWS DEKSLKDAFSSFG VTEVRIVYDKDSG
Sbjct: 17  PSSHPQFRFFNSSSSSASS--NKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSG 74

Query: 183 RSRGFGFVIFTNEDEAKCAKDAMDGKALLGRPLRINFALEKTRGVP-VVPRLSDMGHLNR 359
           R+RGFGFVIF+NED AK AKDAMDGKALLGRPLRINFALEK RG+P VVPR +D GH N+
Sbjct: 75  RARGFGFVIFSNEDAAKSAKDAMDGKALLGRPLRINFALEKPRGIPVVVPRFTDNGHFNK 134

Query: 360 H 362
           H
Sbjct: 135 H 135


>ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus] gi|449522522|ref|XP_004168275.1|
           PREDICTED: glycine-rich RNA-binding protein 2,
           mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/97 (79%), Positives = 87/97 (89%), Gaps = 1/97 (1%)
 Frame = +3

Query: 66  NKLFVGGLSWSADEKSLKDAFSSFGHVTEVRIVYDKDSGRSRGFGFVIFTNEDEAKCAKD 245
           NKLFV GLSWS DE+SLKDAFSSFG VTEVRIVYDKDSGRSRGFGFV F N ++A+CAKD
Sbjct: 44  NKLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCAKD 103

Query: 246 AMDGKALLGRPLRINFALEKTRGVP-VVPRLSDMGHL 353
           AMDGKA+LGRPLRI+FAL+K RG P VVPRLS++ +L
Sbjct: 104 AMDGKAVLGRPLRISFALDKVRGEPVVVPRLSNINNL 140


>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 126

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/95 (82%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
 Frame = +3

Query: 66  NKLFVGGLSWSADEKSLKDAFSSFGHVTEVRIVYDKDSGRSRGFGFVIFTNEDEAKCAKD 245
           +KLFV GLSWS DEKSLKDAFSSFG V+EVRI+YDKDSGRSRGFGFV F+ E+EA CAKD
Sbjct: 25  SKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAKD 84

Query: 246 AMDGKALLGRPLRINFALEKTRGVP-VVPRLSDMG 347
           AMDGKALLGRPLRI+FALEK RG P VVPRLS  G
Sbjct: 85  AMDGKALLGRPLRISFALEKVRGGPIVVPRLSSAG 119


>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
           product [Vitis vinifera]
          Length = 140

 Score =  145 bits (367), Expect = 3e-33
 Identities = 78/119 (65%), Positives = 88/119 (73%), Gaps = 2/119 (1%)
 Frame = +3

Query: 6   SPAPQWRFYXXXXXXXXXXXN-KLFVGGLSWSADEKSLKDAFSSFGHVTEVRIVYDKDSG 182
           +PA  WR +           N KLFV GLSWS DEKSLKDAFSSFG VTEVRI+YDKDSG
Sbjct: 17  NPAADWRCFCSSPSFPTPPSNTKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSG 76

Query: 183 RSRGFGFVIFTNEDEAKCAKDAMDGKALLGRPLRINFALEKTRGVP-VVPRLSDMGHLN 356
           RSRGFGFV F+ E +A+ AKDAMDGKA LGRPLR+++ALEK RG P VVPR  + G  N
Sbjct: 77  RSRGFGFVYFSKEVDARSAKDAMDGKAFLGRPLRVSYALEKVRGGPIVVPRRLNGGDDN 135


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