BLASTX nr result

ID: Glycyrrhiza23_contig00029994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029994
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638442.1| Zinc finger CCCH domain-containing protein, ...    94   2e-17
ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containin...    68   9e-10

>ref|XP_003638442.1| Zinc finger CCCH domain-containing protein, partial [Medicago
           truncatula] gi|355504377|gb|AES85580.1| Zinc finger CCCH
           domain-containing protein, partial [Medicago truncatula]
          Length = 225

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/87 (59%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = -2

Query: 260 QKQLNLVIQVSLENRIXXXXXXXXXXT-PFDVFHGFRGLNIGDGKENCADWXXXXXXXXX 84
           QK LNL++Q SLENR           + PFDV  GFRGLN+GDGKENCADW         
Sbjct: 92  QKNLNLLVQASLENRFNGGGSSVQTQSTPFDVLQGFRGLNLGDGKENCADW--NSNNINN 149

Query: 83  XNKELQQDQVSDESPTSVIENNGVEVE 3
            NKELQ+   SDESPTSVIENNGVE E
Sbjct: 150 NNKELQEASESDESPTSVIENNGVETE 176


>ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Glycine max]
          Length = 360

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 50/95 (52%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
 Frame = -2

Query: 260 QKQLNLVIQVSLENRIXXXXXXXXXXTP---FDVFHGFRGLNIGDG-KENCADW----XX 105
           QKQL+LVIQ SLEN            T    F+V HGFRGL+IG+G KEN ADW      
Sbjct: 109 QKQLHLVIQASLENHYGGGDGGSSGQTQPTLFNVLHGFRGLHIGEGNKENYADWNNNNLN 168

Query: 104 XXXXXXXXNKELQQDQVSDESPTSVIENNG-VEVE 3
                   NKELQ  ++S+ESPTSVIENN  VEVE
Sbjct: 169 IMNNNNSNNKELQ--EISEESPTSVIENNNVVEVE 201


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