BLASTX nr result

ID: Glycyrrhiza23_contig00029975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029975
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   234   5e-60
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   233   2e-59
ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b...   226   2e-57
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...   223   1e-56
ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyr...   221   5e-56

>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score =  234 bits (597), Expect = 5e-60
 Identities = 109/150 (72%), Positives = 125/150 (83%)
 Frame = -2

Query: 452  ELWNNVRVAFGDQPDLVELAENLSQNFESLYDEEVVTYVQKFAEYAKVGCLSAEMKKDVD 273
            ELWNNVR AF DQPD++EL E L+QNFESLY++EVVT VQKF E+AK+  LSAE KKD+D
Sbjct: 1145 ELWNNVRTAFRDQPDVIELVETLAQNFESLYEKEVVTLVQKFEEFAKLDRLSAETKKDLD 1204

Query: 272  DFIASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC 93
              +AST+EIPKAPWDEGVCKVCG D+DDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC
Sbjct: 1205 IVLASTNEIPKAPWDEGVCKVCGFDKDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC 1264

Query: 92   PSCVDGKHATQDVTELKQIIGKRRSKKSQG 3
            PSCV  +   Q+ +   Q+IG+   KK QG
Sbjct: 1265 PSCVSVR-MVQEASVSTQVIGQNSCKKYQG 1293


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score =  233 bits (593), Expect = 2e-59
 Identities = 106/150 (70%), Positives = 123/150 (82%)
 Frame = -2

Query: 452  ELWNNVRVAFGDQPDLVELAENLSQNFESLYDEEVVTYVQKFAEYAKVGCLSAEMKKDVD 273
            ELWNN+  A+ DQPD VELA  LSQNFES++++EV+  VQKF EYAK  CLSAE +K++D
Sbjct: 1143 ELWNNIHTAYADQPDSVELARTLSQNFESMFEKEVLPLVQKFTEYAKSECLSAETEKEID 1202

Query: 272  DFIASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC 93
            DF+ S SEIPKAPWDEGVCKVCGID+DDDSVLLCD CDAEYHTYCLNPPLARIPEGNWYC
Sbjct: 1203 DFLVSASEIPKAPWDEGVCKVCGIDKDDDSVLLCDMCDAEYHTYCLNPPLARIPEGNWYC 1262

Query: 92   PSCVDGKHATQDVTELKQIIGKRRSKKSQG 3
            PSCV G  +  DV+E   +I +R+ K  QG
Sbjct: 1263 PSCVAG-ISMVDVSEHTHVIAQRQGKNCQG 1291


>ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding
           domain-containing protein 9-like [Cucumis sativus]
          Length = 1277

 Score =  226 bits (575), Expect = 2e-57
 Identities = 103/151 (68%), Positives = 122/151 (80%), Gaps = 1/151 (0%)
 Frame = -2

Query: 452 ELWNNVRVAFGDQPDLVELAENLSQNFESLYDEEVVTYVQKFAEYAKVGCLSAEMKKDVD 273
           ELWNN+R A+GDQPDLVEL E LS+NFE LY+ EV++ ++K  E++K+  LSAE K +VD
Sbjct: 285 ELWNNLRYAYGDQPDLVELVETLSENFERLYENEVLSLIEKLKEFSKLESLSAETKVEVD 344

Query: 272 DFIASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC 93
            F+ S +EIPKAPWDEGVCKVCGID+DDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC
Sbjct: 345 GFLVSLNEIPKAPWDEGVCKVCGIDKDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC 404

Query: 92  PSCVDGKHATQDVTE-LKQIIGKRRSKKSQG 3
           PSCV G    +D +E  K II   + KK +G
Sbjct: 405 PSCVMGTRMVEDPSEHTKHIINLHKGKKFRG 435


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Cucumis sativus]
          Length = 2131

 Score =  223 bits (568), Expect = 1e-56
 Identities = 102/152 (67%), Positives = 121/152 (79%), Gaps = 2/152 (1%)
 Frame = -2

Query: 452  ELWNNVRVAFGDQPDLVELAENLSQNFESLYDEEVVTYVQKFAEYAKVGCLSAEMKKDVD 273
            ELWNN+R A+GDQPDLVEL E LS+NFE LY+ EV++ ++K  E++K+  LSAE K +VD
Sbjct: 1138 ELWNNLRYAYGDQPDLVELVETLSENFERLYENEVLSLIEKLKEFSKLESLSAETKVEVD 1197

Query: 272  DFIASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC 93
             F+ S +EIPKAPWDEGVCKVCGID+DDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC
Sbjct: 1198 GFLVSLNEIPKAPWDEGVCKVCGIDKDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC 1257

Query: 92   PSCVDGKHATQDVTE--LKQIIGKRRSKKSQG 3
            PSCV G    +D +E     II   + KK +G
Sbjct: 1258 PSCVMGTRMVEDPSEHTKNHIINLHKGKKFRG 1289


>ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyrata subsp. lyrata]
            gi|297330119|gb|EFH60538.1| methyl-CpG-binding domain 9
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2183

 Score =  221 bits (563), Expect = 5e-56
 Identities = 95/150 (63%), Positives = 119/150 (79%)
 Frame = -2

Query: 452  ELWNNVRVAFGDQPDLVELAENLSQNFESLYDEEVVTYVQKFAEYAKVGCLSAEMKKDVD 273
            ELW+++RV + DQPD VEL   LS+ F+SLY+ EV+  VQK  EY K+ CLSAEMKK++ 
Sbjct: 1212 ELWSSIRVMYADQPDYVELVATLSEKFKSLYEAEVLPLVQKLMEYRKLECLSAEMKKEIK 1271

Query: 272  DFIASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYC 93
            D + S +++PKAPWDEGVCKVCG+D+DDDSVLLCDTCDAEYHTYCLNPPL RIPEGNWYC
Sbjct: 1272 DIVVSVNKLPKAPWDEGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPEGNWYC 1331

Query: 92   PSCVDGKHATQDVTELKQIIGKRRSKKSQG 3
            PSCV  K   Q+  E  +++ +R+ +K QG
Sbjct: 1332 PSCVIAKRMAQEALESYKLVRRRKGRKYQG 1361


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