BLASTX nr result

ID: Glycyrrhiza23_contig00029910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029910
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613272.1| AP-1 complex subunit gamma-1 [Medicago trunc...   172   3e-41
ref|XP_003519616.1| PREDICTED: AP-1 complex subunit gamma-2-like...   168   5e-40
ref|XP_003519615.1| PREDICTED: AP-1 complex subunit gamma-2-like...   168   5e-40
ref|XP_003517779.1| PREDICTED: AP-1 complex subunit gamma-2-like...   168   5e-40
ref|XP_003517778.1| PREDICTED: AP-1 complex subunit gamma-2-like...   168   5e-40

>ref|XP_003613272.1| AP-1 complex subunit gamma-1 [Medicago truncatula]
           gi|355514607|gb|AES96230.1| AP-1 complex subunit gamma-1
           [Medicago truncatula]
          Length = 872

 Score =  172 bits (436), Expect = 3e-41
 Identities = 95/137 (69%), Positives = 102/137 (74%)
 Frame = -3

Query: 413 SDLTTKAMALVSLLKLSSRFPSCSERIREIIVQYRGNLVLELQQRSIEFNAIIAKHQNIR 234
           SDLTTKAM+L +LLKLSSRFPSCSERI EIIVQ++GNL LELQQR+IEFN+IIAKHQNIR
Sbjct: 524 SDLTTKAMSLAALLKLSSRFPSCSERIEEIIVQFKGNLELELQQRAIEFNSIIAKHQNIR 583

Query: 233 STLVERMPVLDEATFIARKAGSLTDLASTPTGPSVSLPNGXXXXXXXXXXXXXXXXXXXX 54
           STLVERMPVLDEATFI R+AGSL   AST   PSVSLPNG                    
Sbjct: 584 STLVERMPVLDEATFIGRRAGSLPGAASTANAPSVSLPNGVAKPAAPLVDLLDLSSDDAP 643

Query: 53  XXXXSGGDPLQDLLGVD 3
               SGGD LQDLLGVD
Sbjct: 644 APSSSGGDFLQDLLGVD 660


>ref|XP_003519616.1| PREDICTED: AP-1 complex subunit gamma-2-like isoform 2 [Glycine
           max]
          Length = 897

 Score =  168 bits (425), Expect = 5e-40
 Identities = 92/138 (66%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
 Frame = -3

Query: 413 SDLTTKAMALVSLLKLSSRFPSCSERIREIIVQYRGNLVLELQQRSIEFNAIIAKHQNIR 234
           SDLTTKAMALV+LLKLSSRFPSCSERI+EIIVQ++G+ VLELQQR+IEF++II+KHQNIR
Sbjct: 524 SDLTTKAMALVALLKLSSRFPSCSERIKEIIVQFKGSFVLELQQRAIEFSSIISKHQNIR 583

Query: 233 STLVERMPVLDEATFIARKAGSLTDLASTPTGPSVSLPNG-XXXXXXXXXXXXXXXXXXX 57
           STLVERMPVLDEAT+I R+AGSL   ASTPT PS +LPNG                    
Sbjct: 584 STLVERMPVLDEATYIGRRAGSLPGAASTPTAPSFNLPNGVAKPVAPLVDLLDLSSDDAP 643

Query: 56  XXXXXSGGDPLQDLLGVD 3
                 GGD LQDLLGVD
Sbjct: 644 APSSSGGGDILQDLLGVD 661


>ref|XP_003519615.1| PREDICTED: AP-1 complex subunit gamma-2-like isoform 1 [Glycine
           max]
          Length = 873

 Score =  168 bits (425), Expect = 5e-40
 Identities = 92/138 (66%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
 Frame = -3

Query: 413 SDLTTKAMALVSLLKLSSRFPSCSERIREIIVQYRGNLVLELQQRSIEFNAIIAKHQNIR 234
           SDLTTKAMALV+LLKLSSRFPSCSERI+EIIVQ++G+ VLELQQR+IEF++II+KHQNIR
Sbjct: 524 SDLTTKAMALVALLKLSSRFPSCSERIKEIIVQFKGSFVLELQQRAIEFSSIISKHQNIR 583

Query: 233 STLVERMPVLDEATFIARKAGSLTDLASTPTGPSVSLPNG-XXXXXXXXXXXXXXXXXXX 57
           STLVERMPVLDEAT+I R+AGSL   ASTPT PS +LPNG                    
Sbjct: 584 STLVERMPVLDEATYIGRRAGSLPGAASTPTAPSFNLPNGVAKPVAPLVDLLDLSSDDAP 643

Query: 56  XXXXXSGGDPLQDLLGVD 3
                 GGD LQDLLGVD
Sbjct: 644 APSSSGGGDILQDLLGVD 661


>ref|XP_003517779.1| PREDICTED: AP-1 complex subunit gamma-2-like isoform 2 [Glycine
           max]
          Length = 896

 Score =  168 bits (425), Expect = 5e-40
 Identities = 94/138 (68%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
 Frame = -3

Query: 413 SDLTTKAMALVSLLKLSSRFPSCSERIREIIVQYRGNLVLELQQRSIEFNAIIAKHQNIR 234
           SDLTTK+MALV+LLKLSSRFPSCSERI+EIIVQ++G+ VLELQQR+IEFN+IIAKHQNIR
Sbjct: 524 SDLTTKSMALVALLKLSSRFPSCSERIKEIIVQFKGSFVLELQQRAIEFNSIIAKHQNIR 583

Query: 233 STLVERMPVLDEATFIARKAGSLTDLASTPTGPSVSLPNG-XXXXXXXXXXXXXXXXXXX 57
           STLVERMPVLDEAT I R+AGSL   ASTPT PS +LPNG                    
Sbjct: 584 STLVERMPVLDEATSIGRRAGSLPGAASTPTAPSFNLPNGTAKPVAPLVDLLDLSSDDAP 643

Query: 56  XXXXXSGGDPLQDLLGVD 3
                SGGD LQDLLGVD
Sbjct: 644 APSSSSGGDILQDLLGVD 661


>ref|XP_003517778.1| PREDICTED: AP-1 complex subunit gamma-2-like isoform 1 [Glycine
           max]
          Length = 872

 Score =  168 bits (425), Expect = 5e-40
 Identities = 94/138 (68%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
 Frame = -3

Query: 413 SDLTTKAMALVSLLKLSSRFPSCSERIREIIVQYRGNLVLELQQRSIEFNAIIAKHQNIR 234
           SDLTTK+MALV+LLKLSSRFPSCSERI+EIIVQ++G+ VLELQQR+IEFN+IIAKHQNIR
Sbjct: 524 SDLTTKSMALVALLKLSSRFPSCSERIKEIIVQFKGSFVLELQQRAIEFNSIIAKHQNIR 583

Query: 233 STLVERMPVLDEATFIARKAGSLTDLASTPTGPSVSLPNG-XXXXXXXXXXXXXXXXXXX 57
           STLVERMPVLDEAT I R+AGSL   ASTPT PS +LPNG                    
Sbjct: 584 STLVERMPVLDEATSIGRRAGSLPGAASTPTAPSFNLPNGTAKPVAPLVDLLDLSSDDAP 643

Query: 56  XXXXXSGGDPLQDLLGVD 3
                SGGD LQDLLGVD
Sbjct: 644 APSSSSGGDILQDLLGVD 661


Top