BLASTX nr result

ID: Glycyrrhiza23_contig00029896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029896
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298162.1| argonaute protein group [Populus trichocarpa...    69   5e-10
ref|XP_002523757.1| eukaryotic translation initiation factor 2c,...    67   2e-09
ref|XP_002314317.1| argonaute protein group [Populus trichocarpa...    67   2e-09
ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...    64   1e-08
ref|XP_003540778.1| PREDICTED: protein argonaute 5-like [Glycine...    64   1e-08

>ref|XP_002298162.1| argonaute protein group [Populus trichocarpa]
           gi|222845420|gb|EEE82967.1| argonaute protein group
           [Populus trichocarpa]
          Length = 904

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 PQRLAQALNGVLRATPCERNMLLGRMFFPEDTVKH*-IGHGAELWRGYHQSLRP*KLGAD 99
           PQ   Q L+ VLRA+P E+ + +GR FF  D  K   +G+G E WRGY+QSLRP ++G  
Sbjct: 185 PQETIQILDIVLRASPSEKYVTVGRSFFSLDLGKKGELGNGIEYWRGYYQSLRPTQMG-- 242

Query: 98  RTYDGESLLSLNIDASNTIVYETTVITELVER 3
                   LSLNID S    YE  ++TE V +
Sbjct: 243 --------LSLNIDVSARSFYEPILVTEFVAK 266


>ref|XP_002523757.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223537061|gb|EEF38697.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 987

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 PQRLAQALNGVLRATPCERNMLLGRMFFPEDT-VKH*IGHGAELWRGYHQSLRP*KLGAD 99
           PQ   Q L+ VLR TP E+   +GR FF  D   K  +G G E WRGY+QSLRP ++G  
Sbjct: 272 PQETIQVLDIVLRETPSEKYTPVGRSFFSPDLGQKGELGDGIEYWRGYYQSLRPTQMG-- 329

Query: 98  RTYDGESLLSLNIDASNTIVYETTVITELVER 3
                   LSLNID S    YE  ++T+ V +
Sbjct: 330 --------LSLNIDVSARSFYEPIIVTDFVSK 353


>ref|XP_002314317.1| argonaute protein group [Populus trichocarpa]
           gi|222850725|gb|EEE88272.1| argonaute protein group
           [Populus trichocarpa]
          Length = 987

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 PQRLAQALNGVLRATPCERNMLLGRMFFPEDT-VKH*IGHGAELWRGYHQSLRP*KLGAD 99
           PQ   Q L+ VLRA+P E+ + +GR FF  D   K  +G G E WRGY+QSLRP ++G  
Sbjct: 253 PQETIQILDIVLRASPSEKYITVGRSFFSPDLGPKGDLGDGIEYWRGYYQSLRPTQMG-- 310

Query: 98  RTYDGESLLSLNIDASNTIVYETTVITELVER 3
                   LS NID S    YE  ++TE V +
Sbjct: 311 --------LSFNIDVSARSFYEPILVTEFVAK 334


>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
           vinifera]
          Length = 1038

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 PQRLAQALNGVLRATPCERNMLLGRMFFPEDTV-KH*IGHGAELWRGYHQSLRP*KLGAD 99
           PQ   Q L+ VLRA+P E+  ++GR FF      K  +G G E WRGY+QSLRP ++G  
Sbjct: 313 PQETIQILDVVLRASPSEKYTVVGRSFFSTQLGRKGELGDGLEYWRGYYQSLRPTQMG-- 370

Query: 98  RTYDGESLLSLNIDASNTIVYETTVITELVER 3
                   LS NID S    YE+ ++T+ V +
Sbjct: 371 --------LSFNIDVSARSFYESILVTDFVAK 394


>ref|XP_003540778.1| PREDICTED: protein argonaute 5-like [Glycine max]
          Length = 953

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = -1

Query: 275 PQRLAQALNGVLRATPCERNMLLGRMFFPEDTVKH*-IGHGAELWRGYHQSLRP*KLGAD 99
           P    QAL+ VLRATP ER +++GR FF     K   +G G E WRGY+QSLRP ++G  
Sbjct: 238 PYETIQALDVVLRATPSERFVVVGRSFFSPSLGKPGSLGSGTEYWRGYYQSLRPTQMG-- 295

Query: 98  RTYDGESLLSLNIDASNTIVYETTVITELVE 6
                   LSLNI+ S    YE   + + +E
Sbjct: 296 --------LSLNINVSARAFYEPIPVIDFIE 318


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