BLASTX nr result

ID: Glycyrrhiza23_contig00029892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029892
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589543.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   149   3e-34
ref|XP_003637764.1| F-box family-4 [Medicago truncatula] gi|3555...   117   2e-24
ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatul...   102   6e-20
gb|ABD28299.1| Cyclin-like F-box [Medicago truncatula]                 96   4e-18
ref|XP_003598640.1| FBD-associated F-box protein [Medicago trunc...    96   4e-18

>ref|XP_003589543.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478591|gb|AES59794.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 523

 Score =  149 bits (377), Expect = 3e-34
 Identities = 83/153 (54%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
 Frame = +1

Query: 127 QQHFVNFVNRALLLTKGASME--SISLFIEDEYDVSLVNTWLSSIFHRSAKHLEIYLHGE 300
           +Q FVNFV RALLLT  +SME    SL I ++ D+SL NTW+SSI +R  K L I+    
Sbjct: 141 EQQFVNFVGRALLLTSISSMELERFSLLINNKRDISLQNTWISSILNRRVKILRIHSSFY 200

Query: 301 KIPFSQLSSHSLFNSISLEELLLMTH-GSEIKIPTTHVHFGYLKSLVFTGIDFTIDSSGD 477
           ++PFS L+SH LFN  SLEEL L+ H  S IK P+  VHFG+LK L   GI F ID+S D
Sbjct: 201 QLPFSALTSHYLFNCTSLEELELVLHVSSTIKFPSISVHFGHLKLLKLYGIFFKIDTSSD 260

Query: 478 HLSLSLPVLKKFKTGNCAWINAKNIVVEAPLLE 576
            L+L+LP+L+KF   NC W   K+++VEAPLLE
Sbjct: 261 CLTLNLPLLRKFDIKNCNWSGGKDLIVEAPLLE 293


>ref|XP_003637764.1| F-box family-4 [Medicago truncatula] gi|355503699|gb|AES84902.1|
           F-box family-4 [Medicago truncatula]
          Length = 476

 Score =  117 bits (292), Expect = 2e-24
 Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 4/154 (2%)
 Frame = +1

Query: 127 QQHFVNFVNRAL---LLTKGASMESISLFIEDEYDVSLVNTWLSSIFHRSAKHLEIYLHG 297
           ++ FVNF+N+     L+     +E+ S  I ++  VSL NTW+SSIF    K+L I+ + 
Sbjct: 117 EECFVNFLNKVTDNTLIFSTIGLENFSFVIYNKRCVSLQNTWISSIF----KNLRIHSYF 172

Query: 298 EKIPFSQLSSHSLFNSISLEEL-LLMTHGSEIKIPTTHVHFGYLKSLVFTGIDFTIDSSG 474
            K+PFS  +S  LF+S SL+EL L +   S IK+PTT +HF  LK L   G+ F ID S 
Sbjct: 173 YKLPFSPSTSDDLFSSCSLQELELRLKVYSTIKVPTTSLHFQQLKFLNLYGVFFDIDPSS 232

Query: 475 DHLSLSLPVLKKFKTGNCAWINAKNIVVEAPLLE 576
           D ++L+LP++KKF+  NC W   K++ V+APLLE
Sbjct: 233 DSMNLNLPLVKKFEISNCHWSKYKDVFVQAPLLE 266


>ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512001|gb|AES93624.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 494

 Score =  102 bits (253), Expect = 6e-20
 Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 26/175 (14%)
 Frame = +1

Query: 130 QHFVNFVNRALLLTKGASMESISLFIEDEYDVSLVNTWLSSIFHRSAKHLEIYLHGEKIP 309
           Q+F  FV+RALLL    +M+ +SLF+   Y+ SL+++WLS+IF R  K L+I+   + IP
Sbjct: 93  QNFSTFVDRALLLNDSLAMDHVSLFLFTLYNWSLLDSWLSNIFKRRVKILQIHSFFQ-IP 151

Query: 310 FSQLSSHSLFNS-ISLEELLLMT----------HGSEIKI------------PTTHVHFG 420
           FS L+SHSLFN+ + LEEL L+T          +  E+K+            P+ ++ F 
Sbjct: 152 FSVLASHSLFNNFLLLEELELLTDSISFINVPMYDEELKLLRNSFNSVDVPAPSKYIVFR 211

Query: 421 YLKSLVFTGIDFTIDS--SGDHLSLSLPVLKKFKTGNCAW-INAKNIVVEAPLLE 576
            LK L   GI+F  DS  S  ++ L  P+L KF+  NCAW ++   +++ APLLE
Sbjct: 212 NLKILNLCGINFNTDSPKSWRNVHLEFPLLTKFEAKNCAWFVDTSLVMIYAPLLE 266


>gb|ABD28299.1| Cyclin-like F-box [Medicago truncatula]
          Length = 437

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 65/155 (41%), Positives = 96/155 (61%), Gaps = 7/155 (4%)
 Frame = +1

Query: 133 HFVNFVNRALLLTKGASMESISLFIEDEYDVSLVNTWLS-SIFHRSAKHLEIYLHGEKIP 309
           +FV+FV RALLLT+    E+ISL +  +YD+SL++ W    +   + K+L I+ H  K+P
Sbjct: 77  NFVSFVTRALLLTR---TETISLSLSGQYDLSLLDAWFGIMLLDGTLKNLRIHSHF-KLP 132

Query: 310 FSQLSSHSLFN-SISLEELLLMTHG-SEIKIPTT-HVHFGYLKSLVFTGIDFTIDS--SG 474
           FS  +S+SLF  ++ LE+L L     S IK+P+   +HFG LK L    I F  DS  S 
Sbjct: 133 FSTFASNSLFKITLLLEKLELHPESISRIKVPSKPDIHFGNLKHLKLYQIKFKTDSTISP 192

Query: 475 DHLSLSLPVLKKFKTGNCAW-INAKNIVVEAPLLE 576
           DH+ L  P L KF+  NC+W ++++ + V APLL+
Sbjct: 193 DHIDLRFPHLTKFEAINCSWFLDSRAVYVHAPLLQ 227


>ref|XP_003598640.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355487688|gb|AES68891.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 450

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 65/155 (41%), Positives = 96/155 (61%), Gaps = 7/155 (4%)
 Frame = +1

Query: 133 HFVNFVNRALLLTKGASMESISLFIEDEYDVSLVNTWLS-SIFHRSAKHLEIYLHGEKIP 309
           +FV+FV RALLLT+    E+ISL +  +YD+SL++ W    +   + K+L I+ H  K+P
Sbjct: 77  NFVSFVTRALLLTR---TETISLSLSGQYDLSLLDAWFGIMLLDGTLKNLRIHSHF-KLP 132

Query: 310 FSQLSSHSLFN-SISLEELLLMTHG-SEIKIPTT-HVHFGYLKSLVFTGIDFTIDS--SG 474
           FS  +S+SLF  ++ LE+L L     S IK+P+   +HFG LK L    I F  DS  S 
Sbjct: 133 FSTFASNSLFKITLLLEKLELHPESISRIKVPSKPDIHFGNLKHLKLYQIKFKTDSTISP 192

Query: 475 DHLSLSLPVLKKFKTGNCAW-INAKNIVVEAPLLE 576
           DH+ L  P L KF+  NC+W ++++ + V APLL+
Sbjct: 193 DHIDLRFPHLTKFEAINCSWFLDSRAVYVHAPLLQ 227


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