BLASTX nr result

ID: Glycyrrhiza23_contig00029888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029888
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36982.1| unknown [Medicago truncatula]                           91   1e-16
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    91   1e-16
gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]            76   2e-12
ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    76   2e-12
ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    69   5e-10

>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/88 (54%), Positives = 62/88 (70%)
 Frame = -3

Query: 265 KWILYLSRNGIKELALENLDFECPYQMPFDVFSCHELTY*DLSSFKLSVPPNFCGFKNLL 86
           KWIL+LSR G+K + L + +   PY++P   FS  +LT+  +  FKL VPPNFCGFK+L+
Sbjct: 114 KWILFLSRKGVKFIQLASNE-SVPYRVPSHFFSFQKLTHVRICKFKLLVPPNFCGFKSLV 172

Query: 85  TLHLYCITFESSGALGSLISGCPLLQEL 2
             H   +TFE  GAL SLISGCPLL+EL
Sbjct: 173 HFHFERMTFE-FGALESLISGCPLLEEL 199


>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/88 (54%), Positives = 62/88 (70%)
 Frame = -3

Query: 265 KWILYLSRNGIKELALENLDFECPYQMPFDVFSCHELTY*DLSSFKLSVPPNFCGFKNLL 86
           KWIL+LSR G+K + L + +   PY++P   FS  +LT+  +  FKL VPPNFCGFK+L+
Sbjct: 195 KWILFLSRKGVKFIQLASNE-SVPYRVPSHFFSFQKLTHVRICKFKLLVPPNFCGFKSLV 253

Query: 85  TLHLYCITFESSGALGSLISGCPLLQEL 2
             H   +TFE  GAL SLISGCPLL+EL
Sbjct: 254 HFHFERMTFE-FGALESLISGCPLLEEL 280


>gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]
          Length = 430

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/91 (51%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = -3

Query: 271 LNKWILYLSRNGIKELALENLDFECPYQMPFDV-FSCHELTY*DLSSFKLSVPPNFCGFK 95
           L+KWI  LS   IK L L N +   P QM + V   C ELTY     F LS+PP+F GF+
Sbjct: 109 LDKWIPILSERNIKHLELVNHETH-PDQMLYIVDLPCKELTYSKFLGFDLSIPPDFSGFE 167

Query: 94  NLLTLHLYCITFESSGALGSLISGCPLLQEL 2
            LL LHL  + FE  GA  SLISGCPLL+ L
Sbjct: 168 RLLELHLLFVRFE-PGAFESLISGCPLLKNL 197


>ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500099|gb|AES81302.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 432

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/91 (51%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = -3

Query: 271 LNKWILYLSRNGIKELALENLDFECPYQMPFDV-FSCHELTY*DLSSFKLSVPPNFCGFK 95
           L+KWI  LS   IK L L N +   P QM + V   C ELTY     F LS+PP+F GF+
Sbjct: 109 LDKWIPILSERNIKHLELVNHETH-PDQMLYIVDLPCKELTYSKFLGFDLSIPPDFSGFE 167

Query: 94  NLLTLHLYCITFESSGALGSLISGCPLLQEL 2
            LL LHL  + FE  GA  SLISGCPLL+ L
Sbjct: 168 RLLELHLLFVRFE-PGAFESLISGCPLLKNL 197


>ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477859|gb|AES59062.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 449

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/90 (42%), Positives = 55/90 (61%)
 Frame = -3

Query: 271 LNKWILYLSRNGIKELALENLDFECPYQMPFDVFSCHELTY*DLSSFKLSVPPNFCGFKN 92
           +++W+L+LSR  IKEL L +   +  Y++P  +FSC  L +  LS  +L +P  F GFKN
Sbjct: 119 VHRWVLHLSRRSIKELLL-HFWLDKRYKIPLSLFSCQSLRHLSLSCCQLKLPTTFEGFKN 177

Query: 91  LLTLHLYCITFESSGALGSLISGCPLLQEL 2
           L  LHL  +T  +     ++ISGCPLL  L
Sbjct: 178 LQYLHLEEVTL-AQDDFENMISGCPLLDHL 206


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