BLASTX nr result

ID: Glycyrrhiza23_contig00029868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029868
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532879.1| PREDICTED: telomerase reverse transcriptase-...   147   9e-34
ref|XP_003545976.1| PREDICTED: telomerase reverse transcriptase-...   145   3e-33
emb|CBI24880.3| unnamed protein product [Vitis vinifera]              108   6e-22
gb|ACG63772.1| telomerase reverse transcriptase [Carica papaya]       104   7e-21
gb|ACH81294.1| telomerase reverse transcriptase [Populus trichoc...    99   4e-19

>ref|XP_003532879.1| PREDICTED: telomerase reverse transcriptase-like [Glycine max]
          Length = 1097

 Score =  147 bits (371), Expect = 9e-34
 Identities = 84/135 (62%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
 Frame = +1

Query: 1   PPPIPFFIP-HSNCPQNEIVKSIIELMSYRRDPASYNVLCSGFDRSKCSSAIVELLSSAS 177
           P P+PFF P  S   Q  IV+  IE M   R+ +S NVLCSG+D SKCSS IVELLS AS
Sbjct: 86  PSPLPFFSPLSSRLSQYMIVRRTIEPMLLLRNESS-NVLCSGYDPSKCSSPIVELLSCAS 144

Query: 178 WCLLLNRVGDDLMVYLLKYTSIFLPAPHGKHYQVGGPPISRLCFDML-CSSKLDNQHPLI 354
           WCLLL+RVGD  M YLL+ TS+FLPAPHGKH+QVGGPPI+ LCF ML  SSK   Q+   
Sbjct: 145 WCLLLSRVGDYFMFYLLRNTSVFLPAPHGKHHQVGGPPINDLCFKMLKGSSKFCYQNN-- 202

Query: 355 HKCGAQKRKRTDVDD 399
              G QKRKR D DD
Sbjct: 203 ---GEQKRKRVDADD 214


>ref|XP_003545976.1| PREDICTED: telomerase reverse transcriptase-like [Glycine max]
          Length = 1181

 Score =  145 bits (367), Expect = 3e-33
 Identities = 83/135 (61%), Positives = 94/135 (69%), Gaps = 2/135 (1%)
 Frame = +1

Query: 1   PPPIPFFIPHSN-CPQNEIVKSIIELMSYRRDPASYNVLCSGFDRSKCSSAIVELLSSAS 177
           P P+PFF P S+   Q+ IV   IE M  R   +  NVLCSG+D+SKCSS IVELLS AS
Sbjct: 87  PSPLPFFFPPSSRLSQHMIVGRTIEQMLLREQHS--NVLCSGYDQSKCSSPIVELLSCAS 144

Query: 178 WCLLLNRVGDDLMVYLLKYTSIFLPAPHGKHYQVGGPPISRLCFDMLC-SSKLDNQHPLI 354
           WCLLL+RVGD  M YLL+ TSIFLPAP GKH QV GPPIS LCF+ML  SSK  +Q    
Sbjct: 145 WCLLLSRVGDYFMFYLLRNTSIFLPAPRGKHNQVAGPPISDLCFEMLMGSSKFHHQ---- 200

Query: 355 HKCGAQKRKRTDVDD 399
            K G QKR+R D DD
Sbjct: 201 -KYGEQKRERADADD 214


>emb|CBI24880.3| unnamed protein product [Vitis vinifera]
          Length = 1108

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/128 (47%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
 Frame = +1

Query: 4   PPIPFFIPHSNCPQNEIVKSIIELMSYRRDPASYNVLCSGFDRSKCSSAIVELLSSASWC 183
           PP+          Q +IV+  IE++   + P S NVLC G+ +    S+IVELL+S++W 
Sbjct: 85  PPLSTIYLDRRWSQLQIVRKTIEMIMCEQ-PGSSNVLCGGYSKCNNLSSIVELLTSSAWG 143

Query: 184 LLLNRVGDDLMVYLLKYTSIFLPAPHGKHYQVGGPPISRLCFDM---LCSSKLDNQHPLI 354
           LLL RVGDD+MVYLLK+TSIFLP PH  H QV GPPIS LC  +   +  SK  +Q P +
Sbjct: 144 LLLERVGDDIMVYLLKHTSIFLPLPHKMHCQVAGPPISDLCIGLSKHISDSK--HQKPSL 201

Query: 355 HKCGAQKR 378
              G QK+
Sbjct: 202 TDLGPQKK 209


>gb|ACG63772.1| telomerase reverse transcriptase [Carica papaya]
          Length = 1204

 Score =  104 bits (260), Expect = 7e-21
 Identities = 57/112 (50%), Positives = 73/112 (65%)
 Frame = +1

Query: 7   PIPFFIPHSNCPQNEIVKSIIELMSYRRDPASYNVLCSGFDRSKCSSAIVELLSSASWCL 186
           P+  F P S+C Q EIV+ IIE++    + +  N+LCS ++R   SS +V+ L+  +W L
Sbjct: 86  PLIDFYPDSHCSQLEIVRRIIEMLL--PEGSKSNILCSDYNRHNRSSPVVDYLTCPAWDL 143

Query: 187 LLNRVGDDLMVYLLKYTSIFLPAPHGKHYQVGGPPISRLCFDMLCSSKLDNQ 342
           L  RVGDDLM YLLK TSIFLP  H KH+QV GPPI+ LC   L   KLD Q
Sbjct: 144 LHKRVGDDLMAYLLKSTSIFLPLCHNKHHQVSGPPINDLCL-KLSKQKLDYQ 194


>gb|ACH81294.1| telomerase reverse transcriptase [Populus trichocarpa]
          Length = 1128

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/102 (50%), Positives = 65/102 (63%)
 Frame = +1

Query: 4   PPIPFFIPHSNCPQNEIVKSIIELMSYRRDPASYNVLCSGFDRSKCSSAIVELLSSASWC 183
           PP+  F   +  PQ  IV  IIE +     P S NVLCSG+D+   SS I E+L+S+ W 
Sbjct: 67  PPVAHFNLENRWPQPLIVSRIIEFI-ITEQPLSNNVLCSGYDKCLRSSPIAEVLTSSVWT 125

Query: 184 LLLNRVGDDLMVYLLKYTSIFLPAPHGKHYQVGGPPISRLCF 309
           LLL RVGD+ M YLLKY+S+FLP P  +H QV GPPI+   F
Sbjct: 126 LLLERVGDEFMNYLLKYSSMFLPLPRQQHQQVAGPPITDFVF 167


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