BLASTX nr result

ID: Glycyrrhiza23_contig00029862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029862
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618301.1| hypothetical protein MTR_6g007360 [Medicago ...    96   4e-18
ref|XP_003627668.1| Neurobeachin-like protein [Medicago truncatu...    92   4e-17
ref|XP_003607454.1| hypothetical protein MTR_4g078180 [Medicago ...    91   1e-16
ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...    65   4e-09
ref|XP_003598846.1| hypothetical protein MTR_3g022250 [Medicago ...    61   1e-07

>ref|XP_003618301.1| hypothetical protein MTR_6g007360 [Medicago truncatula]
           gi|355493316|gb|AES74519.1| hypothetical protein
           MTR_6g007360 [Medicago truncatula]
          Length = 251

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 41/68 (60%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = +2

Query: 74  MEDMWAKKVEILDFTGTDPVGWLARAERFFEEHEIPSSDKLQWAFMSMEGE-AMLWFHSW 250
           M+ +W  K ++  FTGTDP GW+ RAE FF ++EI S DKLQWAFMSME E A+LWF+SW
Sbjct: 1   MDGIWTLKYKLSQFTGTDPAGWITRAEMFFADNEIHSCDKLQWAFMSMEDEKALLWFYSW 60

Query: 251 CQNYPDSE 274
           CQ  PD++
Sbjct: 61  CQENPDAD 68


>ref|XP_003627668.1| Neurobeachin-like protein [Medicago truncatula]
           gi|355521690|gb|AET02144.1| Neurobeachin-like protein
           [Medicago truncatula]
          Length = 2801

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
 Frame = +2

Query: 53  RASVSSEMEDMWAKKVEILDFTGTDPVGWLARAERFFEEHEIPSSDKLQWAFMSMEG-EA 229
           R  V SEM+++W  K ++  FTGTD  GW+ RAE F  ++ I SSDKLQWAFMSM+  E 
Sbjct: 692 RKPVLSEMDEIWTLKKQLSQFTGTDRAGWITRAEMFCADNGIHSSDKLQWAFMSMDDEEV 751

Query: 230 MLWFHSWCQNYPDSE 274
           +LWF+SWCQ  PD++
Sbjct: 752 LLWFYSWCQENPDAD 766


>ref|XP_003607454.1| hypothetical protein MTR_4g078180 [Medicago truncatula]
           gi|355508509|gb|AES89651.1| hypothetical protein
           MTR_4g078180 [Medicago truncatula]
          Length = 178

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = +2

Query: 74  MEDMWAKKVEILDFTGTDPVGWLARAERFFEEHEIPSSDKLQWAFMSMEG-EAMLWFHSW 250
           M+ +W  K ++  FTG DP GW+  AE FF ++EI S DKLQWAFMSME  EA+LWF+SW
Sbjct: 1   MDGIWTLKYKLSQFTGADPAGWITGAEMFFADNEIHSCDKLQWAFMSMEDEEALLWFYSW 60

Query: 251 CQNYPDSE 274
           CQ  PD++
Sbjct: 61  CQENPDAD 68


>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519059|gb|AET00683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 861

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/70 (42%), Positives = 39/70 (55%)
 Frame = +2

Query: 62  VSSEMEDMWAKKVEILDFTGTDPVGWLARAERFFEEHEIPSSDKLQWAFMSMEGEAMLWF 241
           V SEM+ +W  K ++  FTG DP GW+ RAE FF+E                  EA+LWF
Sbjct: 578 VLSEMDGIWTLKYKLSQFTGADPAGWIKRAEMFFDE------------------EALLWF 619

Query: 242 HSWCQNYPDS 271
           +SWCQ  PD+
Sbjct: 620 YSWCQENPDA 629


>ref|XP_003598846.1| hypothetical protein MTR_3g022250 [Medicago truncatula]
           gi|355487894|gb|AES69097.1| hypothetical protein
           MTR_3g022250 [Medicago truncatula]
          Length = 188

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +2

Query: 74  MEDMWAKKVEILDFTGTDPVGWLARAERFFEEHEIPSSDKLQWAFMSMEG-EAMLWFHSW 250
           M+ +W  K ++  FTG DP GW+ R                 WAFMSME  EA+LWF+ W
Sbjct: 1   MDGIWTLKYKLSQFTGADPAGWITR-----------------WAFMSMEDEEALLWFYHW 43

Query: 251 CQNYPDSE 274
           CQ  PD++
Sbjct: 44  CQENPDAD 51


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