BLASTX nr result

ID: Glycyrrhiza23_contig00029845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029845
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|35548...   152   4e-35
ref|XP_003612254.1| F-box/kelch-repeat protein [Medicago truncat...   135   3e-30
ref|XP_003599498.1| F-box/kelch-repeat protein [Medicago truncat...   135   3e-30
ref|XP_003619648.1| F-box/kelch-repeat protein [Medicago truncat...   132   3e-29
ref|XP_003609540.1| F-box/kelch-repeat protein [Medicago truncat...   131   7e-29

>ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|355488547|gb|AES69750.1|
           F-box protein [Medicago truncatula]
          Length = 489

 Score =  152 bits (383), Expect = 4e-35
 Identities = 80/127 (62%), Positives = 94/127 (74%), Gaps = 1/127 (0%)
 Frame = +1

Query: 1   PVPGDFDLD-VNCDLWVLGGFFSLWVMGNGTVDIWVMEEHSGHSSWTKTLVLAIDHIPTP 177
           P P  FD + ++CDLW+ G F SLW MG  T++IWVM+E+  HSSWTKTLVL+ID+I   
Sbjct: 368 PFPDGFDHEPMDCDLWIFGEFLSLWAMGGVTIEIWVMKEYKVHSSWTKTLVLSIDYI--- 424

Query: 178 AQYFFSLIYICSTECGDIVGTNGSTGLVKYNCNGQLLEYRSYPNDPHGFQVAMYTETLLS 357
             Y      ICST+CG I+GTNG TGLVKY+ NGQLLE RSY NDP G  VAMYTE+LLS
Sbjct: 425 --YIQYDPPICSTKCGHIIGTNG-TGLVKYDGNGQLLENRSYYNDPCGRLVAMYTESLLS 481

Query: 358 LPGGSEQ 378
           LPG SEQ
Sbjct: 482 LPGDSEQ 488


>ref|XP_003612254.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355513589|gb|AES95212.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 172

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/130 (55%), Positives = 89/130 (68%), Gaps = 3/130 (2%)
 Frame = +1

Query: 1   PVPGDFDLDV-NCDLWVLGGFFSLWVM--GNGTVDIWVMEEHSGHSSWTKTLVLAIDHIP 171
           P+P D D +  NCD+WV G F S+W M   N TV+IWVM+E+  HSSW KTLVL+ID I 
Sbjct: 48  PLPIDIDYEATNCDVWVFGEFLSIWAMDFANDTVEIWVMKEYKVHSSWKKTLVLSIDGIS 107

Query: 172 TPAQYFFSLIYICSTECGDIVGTNGSTGLVKYNCNGQLLEYRSYPNDPHGFQVAMYTETL 351
           T     FS I  CST+ GDI+GT     LVKYN  GQL+E+  Y +  HG +VA+YTE+L
Sbjct: 108 TK---LFSPI--CSTKSGDIIGTEDGWRLVKYNDKGQLIEWHYYSSSTHGTEVALYTESL 162

Query: 352 LSLPGGSEQA 381
           LSLPG +EQA
Sbjct: 163 LSLPGDNEQA 172


>ref|XP_003599498.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355488546|gb|AES69749.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 375

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/125 (58%), Positives = 88/125 (70%), Gaps = 1/125 (0%)
 Frame = +1

Query: 7   PGDFDLD-VNCDLWVLGGFFSLWVMGNGTVDIWVMEEHSGHSSWTKTLVLAIDHIPTPAQ 183
           P  FD + ++CDLW+ G F SLW M +GTV+IWVM+E+  HSSW KTLVL+ID I    +
Sbjct: 256 PDGFDYEPIDCDLWIFGEFLSLWAMEDGTVEIWVMKEYKVHSSWVKTLVLSIDDI--SIE 313

Query: 184 YFFSLIYICSTECGDIVGTNGSTGLVKYNCNGQLLEYRSYPNDPHGFQVAMYTETLLSLP 363
           Y+     ICST+ G I+GTNG   LVKY+ NGQLLE RSY NDP    V MYTE+LLSLP
Sbjct: 314 YYPP---ICSTKSGGIIGTNGGGELVKYDGNGQLLENRSYFNDPCAL-VVMYTESLLSLP 369

Query: 364 GGSEQ 378
           G S Q
Sbjct: 370 GDSGQ 374


>ref|XP_003619648.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355494663|gb|AES75866.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 373

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/126 (53%), Positives = 90/126 (71%), Gaps = 1/126 (0%)
 Frame = +1

Query: 4   VPGDFDLD-VNCDLWVLGGFFSLWVMGNGTVDIWVMEEHSGHSSWTKTLVLAIDHIPTPA 180
           +P D + + + CDLWV G F S+W M +  V+IWVM+E+  HSSWTKTL  +ID IPT  
Sbjct: 252 LPDDMEHEPIYCDLWVFGEFLSVWTMDSDIVEIWVMKEYKVHSSWTKTLTFSIDDIPT-- 309

Query: 181 QYFFSLIYICSTECGDIVGTNGSTGLVKYNCNGQLLEYRSYPNDPHGFQVAMYTETLLSL 360
           +YF     IC T+ GDI+GT+G+ GLV+Y+ NGQLLEY SY  +  G +VA+YTE+LLSL
Sbjct: 310 RYFSP---ICCTKSGDIIGTDGTAGLVRYDENGQLLEYSSYCIEDCGSRVAVYTESLLSL 366

Query: 361 PGGSEQ 378
           P  ++Q
Sbjct: 367 PDDNDQ 372


>ref|XP_003609540.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355510595|gb|AES91737.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 257

 Score =  131 bits (329), Expect = 7e-29
 Identities = 70/125 (56%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1   PVPGDFDLDVNC-DLWVLGGFFSLWVMGNGTVDIWVMEEHSGHSSWTKTLVLAIDHIPTP 177
           P+P D + D N  DLWV  GF SLWV G+ TVDIWVMEE+  HSSW K LVL ID IP  
Sbjct: 140 PLPDDIENDSNDRDLWVFKGFLSLWVSGDHTVDIWVMEEYGVHSSWIKILVLPIDAIP-- 197

Query: 178 AQYFFSLIYICSTECGDIVGTNGSTGLVKYNCNGQLLEYRSYPNDPHGFQVAMYTETLLS 357
                 L  IC T+ G+IV +NG  GLVKYN  G+ LE+ SY  D  GFQ+ +YTE+LLS
Sbjct: 198 -----YLSPICCTKSGNIVASNGCIGLVKYNDKGEFLEHNSYCEDAPGFQMTLYTESLLS 252

Query: 358 LPGGS 372
           LP  S
Sbjct: 253 LPNDS 257


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