BLASTX nr result

ID: Glycyrrhiza23_contig00029820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029820
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI...   119   2e-25
ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus comm...   118   6e-25
ref|XP_003519307.1| PREDICTED: medium-chain-fatty-acid--CoA liga...   117   8e-25
ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA liga...   117   1e-24
ref|XP_002525882.1| AMP dependent ligase, putative [Ricinus comm...   114   8e-24

>ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 549

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/76 (72%), Positives = 65/76 (85%)
 Frame = -3

Query: 229 ILVLITDDAVAASPSSTVGFTDTYEGLITKGDPEFRWVQPNSEWDPMLLNYTSGTTSSPK 50
           +LVLI D+ VA  PSSTV F  TYE L+ +GDPEF+WV+P SEWDP++LNYTSGTTSSPK
Sbjct: 140 LLVLIADEEVA--PSSTVDFICTYEDLVERGDPEFKWVRPESEWDPIILNYTSGTTSSPK 197

Query: 49  GVVQCHRGVFIVTVDS 2
           GVV CHRG+FIVT+DS
Sbjct: 198 GVVHCHRGIFIVTIDS 213


>ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis]
           gi|223538956|gb|EEF40553.1| AMP dependent ligase,
           putative [Ricinus communis]
          Length = 556

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 5/80 (6%)
 Frame = -3

Query: 226 LVLITDDAVA-----ASPSSTVGFTDTYEGLITKGDPEFRWVQPNSEWDPMLLNYTSGTT 62
           LVLITDD  A      S SSTV F  TYE ++ KGDPEF+WVQP SEWDPM+LNYTSGTT
Sbjct: 141 LVLITDDDEAPASSSTSSSSTVDFCCTYESMVEKGDPEFKWVQPQSEWDPMILNYTSGTT 200

Query: 61  SSPKGVVQCHRGVFIVTVDS 2
           SSPKGVV CHRG++I+TV+S
Sbjct: 201 SSPKGVVHCHRGIYIITVES 220


>ref|XP_003519307.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
          Length = 549

 Score =  117 bits (294), Expect = 8e-25
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = -3

Query: 226 LVLITDDAVAASPSSTVGFTDTYEGLITKGDPEFRWVQPNSEWDPMLLNYTSGTTSSPKG 47
           L+LITD+ +  + S TV F DTYEGL++KGDP F+WV PNSEWDP++LNYTSGTTSSPKG
Sbjct: 142 LILITDETIEKA-SPTVDFLDTYEGLVSKGDPGFKWVLPNSEWDPIVLNYTSGTTSSPKG 200

Query: 46  VVQCHRGVFIVTVDS 2
           VV CHRG FIV VDS
Sbjct: 201 VVHCHRGTFIVAVDS 215


>ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
          Length = 588

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/76 (71%), Positives = 64/76 (84%)
 Frame = -3

Query: 229 ILVLITDDAVAASPSSTVGFTDTYEGLITKGDPEFRWVQPNSEWDPMLLNYTSGTTSSPK 50
           +LVLITDD    SP STV F  TYE ++ +GDPEF+W++P SEW+PM+LNYTSGTTSSPK
Sbjct: 179 LLVLITDDE--DSPPSTVDFLCTYEDMVGRGDPEFKWIRPESEWNPMILNYTSGTTSSPK 236

Query: 49  GVVQCHRGVFIVTVDS 2
           GVV CHRG+FIVTVDS
Sbjct: 237 GVVHCHRGIFIVTVDS 252


>ref|XP_002525882.1| AMP dependent ligase, putative [Ricinus communis]
           gi|223534796|gb|EEF36486.1| AMP dependent ligase,
           putative [Ricinus communis]
          Length = 480

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
 Frame = -3

Query: 226 LVLITDDAVA--ASPSSTVGFTDTYEGLITKGDPEFRWVQPNSEWDPMLLNYTSGTTSSP 53
           LVLI DD V+   + SS+V F DTYEGL+ KGDP F+WV P +EWDP++LNYTSGTTS+P
Sbjct: 56  LVLIADDVVSDPLNASSSVEFVDTYEGLMLKGDPHFKWVMPENEWDPLVLNYTSGTTSAP 115

Query: 52  KGVVQCHRGVFIVTVDS 2
           KGVV CHRG FI TVDS
Sbjct: 116 KGVVHCHRGFFITTVDS 132


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