BLASTX nr result

ID: Glycyrrhiza23_contig00029791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029791
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein lig...   323   4e-86
emb|CBI30594.3| unnamed protein product [Vitis vinifera]              323   5e-86
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85
ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...   320   3e-85
emb|CAN59794.1| hypothetical protein VITISV_001902 [Vitis vinifera]   274   3e-71

>ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
            vinifera]
          Length = 534

 Score =  323 bits (828), Expect = 4e-86
 Identities = 194/355 (54%), Positives = 222/355 (62%), Gaps = 30/355 (8%)
 Frame = -1

Query: 977  AMPAQKRSYEAIKEEE-DAQIINPEQPAAEDDGVESDGSHSSSNXXXXXXXXXEFVVIKL 801
            +MPAQKR+++A++ +       N  +P  + DG ESD S S SN          FV++KL
Sbjct: 101  SMPAQKRAFDAMEGDPLQRHHGNHHEPPEDGDGYESDRSPSWSNGEKDE-----FVIVKL 155

Query: 800  SDIHKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD 621
            ++I KEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD
Sbjct: 156  AEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD 215

Query: 620  DPNFDALIAALYPDIDKYEEQ-------------KIQASIAQTLHRQTEASSKKR-NAKA 483
            DPN+DALIAALYPDIDKYE++             +IQASIAQTL RQ+EA  +KR  AKA
Sbjct: 216  DPNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGRKRTTAKA 275

Query: 482  TAMAFLRRSQGNYRTSHLRRRRNIRNTGQVSXXXXXXXXXXXXXXXXXXDE--QMETKPS 309
            TA AF RRSQGNYR    R RRN R T  +                    E    E KP 
Sbjct: 276  TAAAFARRSQGNYR----RGRRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHSAEVKPK 331

Query: 308  GCKRGEQETQFPQHSAITDPDGTGDENIQEVNREIMSASG-------TLAWGKNGQRSNN 150
              +R          S   + DG GDEN  E NRE M AS         LAWGK G RS+ 
Sbjct: 332  RSRRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILAWGKGGMRSHT 391

Query: 149  RV------NGKNARNSRISRLVDHLRNSASNDYGLSVFLMLVSLDEQSIPSLQLP 3
            R       NGKNAR+SR+S+LVD+LRN   ND  L + LMLVSLDEQ IPSLQ P
Sbjct: 392  RYGSVSGGNGKNARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIPSLQTP 446


>emb|CBI30594.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  323 bits (827), Expect = 5e-86
 Identities = 194/354 (54%), Positives = 221/354 (62%), Gaps = 30/354 (8%)
 Frame = -1

Query: 974  MPAQKRSYEAIKEEE-DAQIINPEQPAAEDDGVESDGSHSSSNXXXXXXXXXEFVVIKLS 798
            MPAQKR+++A++ +       N  +P  + DG ESD S S SN          FV++KL+
Sbjct: 1    MPAQKRAFDAMEGDPLQRHHGNHHEPPEDGDGYESDRSPSWSNGEKDE-----FVIVKLA 55

Query: 797  DIHKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 618
            +I KEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD
Sbjct: 56   EIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 115

Query: 617  PNFDALIAALYPDIDKYEEQ-------------KIQASIAQTLHRQTEASSKKR-NAKAT 480
            PN+DALIAALYPDIDKYE++             +IQASIAQTL RQ+EA  +KR  AKAT
Sbjct: 116  PNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGRKRTTAKAT 175

Query: 479  AMAFLRRSQGNYRTSHLRRRRNIRNTGQVSXXXXXXXXXXXXXXXXXXDE--QMETKPSG 306
            A AF RRSQGNYR    R RRN R T  +                    E    E KP  
Sbjct: 176  AAAFARRSQGNYR----RGRRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHSAEVKPKR 231

Query: 305  CKRGEQETQFPQHSAITDPDGTGDENIQEVNREIMSASG-------TLAWGKNGQRSNNR 147
             +R          S   + DG GDEN  E NRE M AS         LAWGK G RS+ R
Sbjct: 232  SRRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILAWGKGGMRSHTR 291

Query: 146  V------NGKNARNSRISRLVDHLRNSASNDYGLSVFLMLVSLDEQSIPSLQLP 3
                   NGKNAR+SR+S+LVD+LRN   ND  L + LMLVSLDEQ IPSLQ P
Sbjct: 292  YGSVSGGNGKNARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIPSLQTP 345


>ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|222870857|gb|EEF07988.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  321 bits (823), Expect = 2e-85
 Identities = 193/366 (52%), Positives = 225/366 (61%), Gaps = 42/366 (11%)
 Frame = -1

Query: 974  MPAQKRSYEAIKEEEDA--------------QIINPEQPAAEDDGVESDGSHSSSNXXXX 837
            MPAQKRSYE +++E+DA              Q   P     +D GVESD S  SSN    
Sbjct: 1    MPAQKRSYETLQKEDDALLRQQQDHTNNNHEQKQEPRSDIDDDGGVESDRSQPSSNINED 60

Query: 836  XXXXXEFVVIKLSDIHKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC 657
                  +VV+KLS+I KEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC
Sbjct: 61   VKEE--YVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC 118

Query: 656  RTHCASRRSLRDDPNFDALIAALYPDIDKYEEQ-------------KIQASIAQTLHRQT 516
            RTHCASRRSLRDDPN+DALIAALYPDIDKYEE+             +IQA+IAQT  RQ 
Sbjct: 119  RTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFQEDEKARNKEIQATIAQTFDRQA 178

Query: 515  EASSKKRN-AKATAMAFLRRSQGNYRTSHLRRRRNIRNTG-QVSXXXXXXXXXXXXXXXX 342
            EA S+KR+ AKATA  F RR+   +R +H R RRN R    Q S                
Sbjct: 179  EALSRKRSTAKATAAVFARRTPSRFRDAHSRGRRNYRIAELQGSDDNEDANGGGGKDSSS 238

Query: 341  XXDEQMETKPSGCKRGEQETQFPQHSAITDPDGTGDENIQEVNRE-------IMSASGTL 183
              +   E KP          ++ + SA  + DG+G EN  EVN+E       ++S+S  L
Sbjct: 239  TDEHSAEVKPK---------RYRRCSAAFNADGSGGENDSEVNKESVGASAGLISSSERL 289

Query: 182  AWGKNGQRSNNRV------NGKNARNSRISRLVDHLRNSASNDYGLSVFLMLVSLDEQSI 21
            AWGKNG RS+ R       N KNARNSRIS+L D+LRN   ND  L + LMLVS DEQ +
Sbjct: 290  AWGKNGMRSHTRYGSANGSNVKNARNSRISKLADYLRNLDENDNELDINLMLVSFDEQRV 349

Query: 20   PSLQLP 3
            PSLQ P
Sbjct: 350  PSLQRP 355


>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
            predicted protein [Populus trichocarpa]
          Length = 463

 Score =  320 bits (821), Expect = 3e-85
 Identities = 191/375 (50%), Positives = 224/375 (59%), Gaps = 51/375 (13%)
 Frame = -1

Query: 974  MPAQKRSYEAIKEEEDAQII--------------NPEQPAAEDDGVESDGS--------- 864
            MPAQKRS+E +++E+D  +I              N EQ     D ++ DG          
Sbjct: 1    MPAQKRSHETLQKEDDDALIQQQQDHTNNNNNNNNHEQKQQPHDDIDDDGGGGGGDEQSD 60

Query: 863  HSSSNXXXXXXXXXEFVVIKLSDIHKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMR 684
             S S+         E+VV+KLS+I KEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMR
Sbjct: 61   RSQSSSSINEDVKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMR 120

Query: 683  LGNNECPACRTHCASRRSLRDDPNFDALIAALYPDIDKYEEQ-------------KIQAS 543
            LGNNECPACRTHCASRRSLRDDPN+DALI+ALYPDIDKYEE+             +IQA+
Sbjct: 121  LGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFQEEEKARNKQIQAT 180

Query: 542  IAQTLHRQTEA-SSKKRNAKATAMAFLRRSQGNYRTSHLRRRRNIRNTG-QVSXXXXXXX 369
            IAQT HRQ EA S KK  AK TA AF RR+   +R +H R RRN R  G Q S       
Sbjct: 181  IAQTFHRQAEALSRKKTTAKVTAAAFARRTPSRFRDAHSRGRRNYRMAGFQGSDDNEDAN 240

Query: 368  XXXXXXXXXXXDEQMETKPSGCKRGEQETQFPQHSAITDPDGTGDENIQEVNRE------ 207
                       +   E KP  CK+          SA  + DG GDEN  EVN+E      
Sbjct: 241  GDGGKDSSSADEHSAEVKPKRCKKWA-----GARSAAVNADGGGDENDSEVNKESVGGSS 295

Query: 206  -IMSASGTLAWGKNGQRSNNRV------NGKNARNSRISRLVDHLRNSASNDYGLSVFLM 48
             ++ +S  LAWGKNG RS+ R       N KNAR+SRIS+L D+LRN   ND  L + LM
Sbjct: 296  GLVGSSERLAWGKNGMRSHTRYGSANGSNVKNARSSRISKLADYLRNLEGNDNELDINLM 355

Query: 47   LVSLDEQSIPSLQLP 3
            LVS DEQ +PSLQ P
Sbjct: 356  LVSFDEQRVPSLQRP 370


>emb|CAN59794.1| hypothetical protein VITISV_001902 [Vitis vinifera]
          Length = 636

 Score =  274 bits (700), Expect = 3e-71
 Identities = 177/374 (47%), Positives = 205/374 (54%), Gaps = 70/374 (18%)
 Frame = -1

Query: 983  VKAMPAQKRSYEAIKEEE-DAQIINPEQPAAEDDGVESDGSHSSSNXXXXXXXXXEFVVI 807
            V AMPAQKR+++A++ +       N  +P  + DG ESD S S SN          FV++
Sbjct: 190  VAAMPAQKRAFDAMEGDPLQRHHGNHHEPPEDGDGYESDRSPSWSNGEKDE-----FVIV 244

Query: 806  KLSDIHKEVQCPICLGIIR---------------------------KTRTVMECLHRFCR 708
            KL++I KEVQCPICLG ++                           KTRTVMECLHRFCR
Sbjct: 245  KLAEIRKEVQCPICLGHLQETARCMIAHHLKEFVXAYDIACMGSSGKTRTVMECLHRFCR 304

Query: 707  ECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALIAALYPDIDKYEEQ---------- 558
            ECIDKSMRLGNNECPACRTHCASRRSLRDDPN+DALIAALYPDIDKYE++          
Sbjct: 305  ECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEQEVYLTNSMPSQ 364

Query: 557  ----------------KIQASIAQTLHRQTEASSKKR-NAKATAMAFLRRSQGNYRTSHL 429
                            +IQASIAQTL RQ+EA  +KR  AKATA AF RRSQGNYR    
Sbjct: 365  IGKELAFHEEEKTRNKQIQASIAQTLRRQSEALGRKRTTAKATAAAFARRSQGNYR---- 420

Query: 428  RRRRNIRNTGQVSXXXXXXXXXXXXXXXXXXDE--QMETKPSGCKRGEQETQFPQHSAIT 255
            R RRN R T  +                    E    E KP   +R          S   
Sbjct: 421  RGRRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHSAEVKPKRSRRWGGVRFSQPSSGSA 480

Query: 254  DPDGTGDENIQEVNREIMSASG-------TLAWGKNGQRSNNRV------NGKNARNSRI 114
            + DG GDEN  E NRE M AS         LAWGK G RS+ R       NGKNAR+SR+
Sbjct: 481  NADGGGDENDLEANREAMGASAGLVGNSEILAWGKGGMRSHTRYGSVSGGNGKNARSSRL 540

Query: 113  SRLVDHLRNSASND 72
            S+LVD+LRN   ND
Sbjct: 541  SKLVDYLRNLDQND 554


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