BLASTX nr result

ID: Glycyrrhiza23_contig00029785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029785
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610089.1| WD repeat-containing protein [Medicago trunc...   196   2e-48
ref|XP_003541278.1| PREDICTED: WD repeat-containing protein 75-l...   191   5e-47
ref|XP_003549375.1| PREDICTED: WD repeat-containing protein 75-l...   185   3e-45
ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi...   174   9e-42

>ref|XP_003610089.1| WD repeat-containing protein [Medicago truncatula]
           gi|355511144|gb|AES92286.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 786

 Score =  196 bits (497), Expect = 2e-48
 Identities = 94/116 (81%), Positives = 104/116 (89%)
 Frame = +2

Query: 2   MDSDSAVSKKITLHHTKTFTVLAFHPTERTVAAGDVTGRILIWRGFGAQKFRESSELLNG 181
           +DS+SAVSKKI+LHHTKTF+VLAFHPTER VAAGDVTGRILI+RGFGA+ F+E+  LLN 
Sbjct: 187 VDSNSAVSKKISLHHTKTFSVLAFHPTERIVAAGDVTGRILIFRGFGAKNFQENDVLLNR 246

Query: 182 RSMADGEDKPGVRENDDAESCSTWHWHSAGVSLLSFSSDGAYLYSGGKEGVLVLWQ 349
            SM D E KPGVR+NDDAESCSTWHWHS  V+LLSFSSDG YLYSGGKEGVLVLWQ
Sbjct: 247 TSMTDEECKPGVRQNDDAESCSTWHWHSDAVNLLSFSSDGVYLYSGGKEGVLVLWQ 302


>ref|XP_003541278.1| PREDICTED: WD repeat-containing protein 75-like [Glycine max]
          Length = 802

 Score =  191 bits (485), Expect = 5e-47
 Identities = 96/115 (83%), Positives = 102/115 (88%)
 Frame = +2

Query: 5   DSDSAVSKKITLHHTKTFTVLAFHPTERTVAAGDVTGRILIWRGFGAQKFRESSELLNGR 184
           DSDSAVSKKITLHHTKTFTVLAFHPTERTVAAGDVTGRILIW  FGAQKF  SS L+NGR
Sbjct: 191 DSDSAVSKKITLHHTKTFTVLAFHPTERTVAAGDVTGRILIWHEFGAQKFLNSSGLVNGR 250

Query: 185 SMADGEDKPGVRENDDAESCSTWHWHSAGVSLLSFSSDGAYLYSGGKEGVLVLWQ 349
           SM D E+K GVR+NDDAES  T HWHS+GV  LSFSSDGAYLYSGGKEGVLV+W+
Sbjct: 251 SM-DQENKDGVRQNDDAESSVTRHWHSSGVRCLSFSSDGAYLYSGGKEGVLVIWR 304


>ref|XP_003549375.1| PREDICTED: WD repeat-containing protein 75-like [Glycine max]
          Length = 803

 Score =  185 bits (470), Expect = 3e-45
 Identities = 93/115 (80%), Positives = 100/115 (86%)
 Frame = +2

Query: 5   DSDSAVSKKITLHHTKTFTVLAFHPTERTVAAGDVTGRILIWRGFGAQKFRESSELLNGR 184
           DSDSAVSKKI LHHTKT TVLAFHPTERTVAAGDVTGRILIW  FGAQKF  SS L+NGR
Sbjct: 192 DSDSAVSKKIILHHTKTLTVLAFHPTERTVAAGDVTGRILIWHEFGAQKFLSSSGLINGR 251

Query: 185 SMADGEDKPGVRENDDAESCSTWHWHSAGVSLLSFSSDGAYLYSGGKEGVLVLWQ 349
           S  D E+K GVR+NDDAES  T HWHS+GVS LSFSSDGA+LYSGGKEGVLV+W+
Sbjct: 252 S-TDQENKDGVRQNDDAESSVTRHWHSSGVSCLSFSSDGAFLYSGGKEGVLVIWR 305


>ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|222865901|gb|EEF03032.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/115 (69%), Positives = 96/115 (83%)
 Frame = +2

Query: 5   DSDSAVSKKITLHHTKTFTVLAFHPTERTVAAGDVTGRILIWRGFGAQKFRESSELLNGR 184
           +S+ AV KKITLHHTK  TVLAFHP +R +AAGDVTGRILIWRGFG + F +   L+  R
Sbjct: 196 ESERAVVKKITLHHTKNMTVLAFHPNQRIIAAGDVTGRILIWRGFGDRTFVDDDRLVGVR 255

Query: 185 SMADGEDKPGVRENDDAESCSTWHWHSAGVSLLSFSSDGAYLYSGGKEGVLVLWQ 349
           SM +GE++PGVR +DDA+SC+TWHWHSA V++L FS DGAYLYSGGKEGVLV+WQ
Sbjct: 256 SMNNGEERPGVRGDDDADSCTTWHWHSAEVNVLFFSLDGAYLYSGGKEGVLVVWQ 310


>ref|XP_002533224.1| wd40 protein, putative [Ricinus communis]
           gi|223526967|gb|EEF29164.1| wd40 protein, putative
           [Ricinus communis]
          Length = 807

 Score =  174 bits (440), Expect = 9e-42
 Identities = 79/115 (68%), Positives = 98/115 (85%)
 Frame = +2

Query: 5   DSDSAVSKKITLHHTKTFTVLAFHPTERTVAAGDVTGRILIWRGFGAQKFRESSELLNGR 184
           DS+ A+ KKITLHHT+  TV+AFHPT++ VAAGDVTGRILIWRGFG + F  +  L++G 
Sbjct: 192 DSERAIVKKITLHHTRNMTVVAFHPTQKIVAAGDVTGRILIWRGFGNRSFGVNDILMSGI 251

Query: 185 SMADGEDKPGVRENDDAESCSTWHWHSAGVSLLSFSSDGAYLYSGGKEGVLVLWQ 349
           SM + E++PGVR +DDAESC+TWHWH + V++LSFSSDGAYLYSGGKEGVLV+WQ
Sbjct: 252 SMNNDEERPGVRGDDDAESCTTWHWHPSEVNVLSFSSDGAYLYSGGKEGVLVVWQ 306


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