BLASTX nr result

ID: Glycyrrhiza23_contig00029784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029784
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding...   127   9e-28
gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsi...   113   2e-23
ref|XP_003544010.1| PREDICTED: uncharacterized protein LOC100782...   112   2e-23
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]   112   3e-23
emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera]   112   4e-23

>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
           [Glycine max]
          Length = 1482

 Score =  127 bits (319), Expect = 9e-28
 Identities = 68/117 (58%), Positives = 81/117 (69%)
 Frame = +3

Query: 3   SLFTFAREGHHVIMLIYVDDIIITGDYFPLIQELTSQLNDNFALKQLGDLEYFLGIEVQR 182
           SLF   ++ + V +L+YVDDI I G    LI+ L S LN  FALKQLG L+YFLGIEV  
Sbjct: 405 SLFILKKDRNVVYLLVYVDDINIIGSSNYLIKSLVSHLNSTFALKQLGQLDYFLGIEVHH 464

Query: 183 LKDGSLFLSQTKYIRDLLAKASMLEAKPISTPMVANLKLSKHGNDLLEDPSFYRSIV 353
              GS+ L+Q+KYI DLL K  M EAKPIS+PMV NLKLSK GNDL    + YRS+V
Sbjct: 465 TPTGSVLLTQSKYIHDLLHKTDMAEAKPISSPMVTNLKLSKTGNDLPPRSTMYRSVV 521



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/66 (45%), Positives = 43/66 (65%)
 Frame = +3

Query: 57  DDIIITGDYFPLIQELTSQLNDNFALKQLGDLEYFLGIEVQRLKDGSLFLSQTKYIRDLL 236
           DDI+ITGD    +++L + L+ +F  K LG L+Y LGIEV + K  S+ +SQ KY RD+L
Sbjct: 604 DDIVITGDDHRGVRDLKNHLSQHFQTKDLGQLKYLLGIEVTQSKT-SVAISQRKYARDIL 662

Query: 237 AKASML 254
               M+
Sbjct: 663 EDIGMM 668


>gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 387

 Score =  113 bits (282), Expect = 2e-23
 Identities = 63/117 (53%), Positives = 75/117 (64%)
 Frame = +3

Query: 3   SLFTFAREGHHVIMLIYVDDIIITGDYFPLIQELTSQLNDNFALKQLGDLEYFLGIEVQR 182
           SLF + R   ++ +L+YVDDIIITGD   L++     L D F+LK LG L YFLGIE  R
Sbjct: 56  SLFIYKRANSYLYVLVYVDDIIITGDA-SLVKNFNVSLADRFSLKDLGALSYFLGIEATR 114

Query: 183 LKDGSLFLSQTKYIRDLLAKASMLEAKPISTPMVANLKLSKHGNDLLEDPSFYRSIV 353
            K G L L Q KYI DLLAK  ML+AKPISTPM    KLS H   +L+D   YR I+
Sbjct: 115 TKKG-LHLMQRKYITDLLAKTHMLDAKPISTPMATTPKLSLHSGTILDDAKEYRMII 170


>ref|XP_003544010.1| PREDICTED: uncharacterized protein LOC100782657 [Glycine max]
          Length = 778

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/90 (58%), Positives = 71/90 (78%)
 Frame = +3

Query: 84  FPLIQELTSQLNDNFALKQLGDLEYFLGIEVQRLKDGSLFLSQTKYIRDLLAKASMLEAK 263
           + L Q+LT++L+ NF+LKQLG L+YFLGIE++ + DG++  +Q+KYIRDLL K  M EA+
Sbjct: 502 YGLKQQLTTKLHSNFSLKQLGKLDYFLGIEIKSVADGTILQTQSKYIRDLLQKTKMAEAQ 561

Query: 264 PISTPMVANLKLSKHGNDLLEDPSFYRSIV 353
           PIS+PM AN KL+K G DL  DPS YRS+V
Sbjct: 562 PISSPMTANCKLTKAGTDLFSDPSLYRSVV 591


>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
          Length = 1379

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/117 (48%), Positives = 79/117 (67%)
 Frame = +3

Query: 3   SLFTFAREGHHVIMLIYVDDIIITGDYFPLIQELTSQLNDNFALKQLGDLEYFLGIEVQR 182
           SLF F ++   + +L+YVDDII+TG+   LI    SQL+  FA+K LG L YFLG+EV  
Sbjct: 455 SLFVFTKKDDLIYLLLYVDDIILTGNNPALINRFISQLHSEFAVKDLGPLSYFLGLEVSY 514

Query: 183 LKDGSLFLSQTKYIRDLLAKASMLEAKPISTPMVANLKLSKHGNDLLEDPSFYRSIV 353
           + DG  FLSQ KY  D+LA+A +L++KP+ TPM+ + +LS  G     DP+ YRS+V
Sbjct: 515 IPDG-FFLSQVKYATDILARAQLLDSKPVPTPMIVSQRLSSEGTP-FADPTLYRSLV 569


>emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera]
          Length = 1095

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/117 (47%), Positives = 81/117 (69%)
 Frame = +3

Query: 3    SLFTFAREGHHVIMLIYVDDIIITGDYFPLIQELTSQLNDNFALKQLGDLEYFLGIEVQR 182
            SLF F ++   + +L+YVD+II+TG+   LI +  SQL+  FA+K LG L YFLG+EV  
Sbjct: 758  SLFVFTKKDDLIYLLLYVDNIILTGNNPALINQFISQLHSEFAVKDLGPLSYFLGLEVSY 817

Query: 183  LKDGSLFLSQTKYIRDLLAKASMLEAKPISTPMVANLKLSKHGNDLLEDPSFYRSIV 353
            + DG  FLSQ KY  D+LA+A +L++KP++TPM+ + +LS  G     DP+ YRS+V
Sbjct: 818  IPDG-FFLSQVKYATDILARAQLLDSKPVTTPMIVSQRLSSEGTP-FADPTLYRSLV 872


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