BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029778
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593920.1| Pentatricopeptide repeat-containing protein ...    96   4e-19
emb|CBI31981.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_002522400.1| pentatricopeptide repeat-containing protein,...    80   2e-13
ref|XP_002890625.1| pentatricopeptide repeat-containing protein ...    78   6e-13

>ref|XP_003593920.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482968|gb|AES64171.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 801

 Score = 95.5 bits (236), Expect(2) = 4e-19
 Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 5/83 (6%)
 Frame = +2

Query: 113 DQLTYRGIALDQFSFIMVLK--GRGSEIGFG---HGIA*RSGNIMFVDVKNTLLRFYCVC 277
           ++L   G  LD FSFI V+K  GR  E+GFG   HGI  +SGN  FVD+ NT+L+FYCVC
Sbjct: 98  NKLRNSGNGLDPFSFIAVMKACGRSFEVGFGRGVHGIVVKSGNRFFVDLNNTILQFYCVC 157

Query: 278 RRFEYAHKLFDEFPERNDLVSWN 346
            R + A K+FDE PERNDLVSWN
Sbjct: 158 GRIDDARKVFDECPERNDLVSWN 180



 Score = 23.9 bits (50), Expect(2) = 4e-19
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 348 LMGGCLLVSQNFWIF*YF 401
           LMGGC+LVS   ++F  F
Sbjct: 182 LMGGCVLVSDYSFVFDLF 199


>emb|CBI31981.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
 Frame = +2

Query: 140 LDQFSFIMVLKGRGSEIGFG-----HGIA*RSGNIMFVDVKNTLLRFYCVCRRFEYAHKL 304
           LDQFSFI  LK    E+ +      HG+  RSG+ +F +VKN LL FYCVC R   AH+L
Sbjct: 125 LDQFSFIPTLKACARELAYETGQGIHGVVVRSGHGLFTNVKNALLHFYCVCGRIGDAHQL 184

Query: 305 FDEFPERNDLVSWNT 349
           FDE P + DLVSWNT
Sbjct: 185 FDEIPPKIDLVSWNT 199


>ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Vitis vinifera]
          Length = 597

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
 Frame = +2

Query: 140 LDQFSFIMVLKGRGSEIGFG-----HGIA*RSGNIMFVDVKNTLLRFYCVCRRFEYAHKL 304
           LDQFSFI  LK    E+ +      HG+  RSG+ +F +VKN LL FYCVC R   AH+L
Sbjct: 125 LDQFSFIPTLKACARELAYETGQGIHGVVVRSGHGLFTNVKNALLHFYCVCGRIGDAHQL 184

Query: 305 FDEFPERNDLVSWNT 349
           FDE P + DLVSWNT
Sbjct: 185 FDEIPPKIDLVSWNT 199


>ref|XP_002522400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538285|gb|EEF39892.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 476

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/76 (59%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
 Frame = +2

Query: 134 IALDQFSFIMVLKGRGSEI----GFG-HGIA*RSGNIMFVDVKNTLLRFYCVCRRFEYAH 298
           I LDQFSFI +LK    E+    G G HGI  RSG +MFV+VKNTLL  Y VC     A 
Sbjct: 123 IELDQFSFITILKASARELAVKAGQGIHGIVARSGYLMFVNVKNTLLHLYSVCGLIGDAQ 182

Query: 299 KLFDEFPERNDLVSWN 346
           KLFDEF + NDLVSWN
Sbjct: 183 KLFDEFSQLNDLVSWN 198


>ref|XP_002890625.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336467|gb|EFH66884.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 568

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
 Frame = +2

Query: 113 DQLTYRGIALDQFSFIMVLKGRG----SEIGFG-HGIA*RSGNIMFVDVKNTLLRFYCVC 277
           +QL  +GI LD+FSFI  LK       S IG G HGIA RSG ++F D++N LL+FYCVC
Sbjct: 110 NQLRAKGITLDRFSFITTLKSCSRDLCSSIGEGLHGIALRSGFMVFTDLRNALLQFYCVC 169

Query: 278 RRFEYAHKLFDEFPERNDLVSWNT 349
            R   A K+FDE P   D VS++T
Sbjct: 170 GRINDARKVFDEMPHSVDSVSFST 193