BLASTX nr result

ID: Glycyrrhiza23_contig00029771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029771
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545609.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   152   2e-35
ref|XP_003603615.1| RCC1 and BTB domain-containing protein [Medi...   149   2e-34
ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   137   1e-30
ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...   135   5e-30
ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   133   2e-29

>ref|XP_003545609.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 576

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/105 (70%), Positives = 87/105 (82%), Gaps = 8/105 (7%)
 Frame = +3

Query: 3   HTIIVAQEGYRLWSWGRGRSGVLGNGKVMDCYTPTIVLWPPLVEDFKEEGLQSS------ 164
           HT+I+A EG +LWSWGRGRSGVLGNGK MD YTPTIVLWPPL+EDFK+E L SS      
Sbjct: 400 HTVIIAHEGCKLWSWGRGRSGVLGNGKTMDSYTPTIVLWPPLMEDFKQEELYSSCEHDKN 459

Query: 165 --EGVTETDEKLSSAANELELLKTKLSIMERYASVLHESLFGKPF 293
             + VTE DE+LSSA N+L+LL+TKLSI+ERYAS+LH SLFG+PF
Sbjct: 460 ETKEVTEIDERLSSALNQLKLLQTKLSIIERYASILHSSLFGEPF 504


>ref|XP_003603615.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
           gi|355492663|gb|AES73866.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
          Length = 563

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/108 (65%), Positives = 86/108 (79%), Gaps = 11/108 (10%)
 Frame = +3

Query: 3   HTIIVAQEGYRLWSWGRGRSGVLGNGKVMDCYTPTIVLWPPLVEDFKEEGLQSSEG---- 170
           HT++VAQEG+++WSWGRGRSGVLGNGK MD YTPTIV WPP +E  +EE L SS+G    
Sbjct: 385 HTVVVAQEGHKVWSWGRGRSGVLGNGKEMDSYTPTIVPWPPTIEGLEEEELNSSDGQDKV 444

Query: 171 -------VTETDEKLSSAANELELLKTKLSIMERYASVLHESLFGKPF 293
                  + ETDEKLS+A NEL+LL+TKLSIME+YAS+LH S+FGKPF
Sbjct: 445 AEKKPEIIAETDEKLSTALNELKLLQTKLSIMEKYASILHGSIFGKPF 492


>ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 571

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/108 (61%), Positives = 80/108 (74%), Gaps = 11/108 (10%)
 Frame = +3

Query: 3   HTIIVAQEGYRLWSWGRGRSGVLGNGKVMDCYTPTIVLWPPLVEDFKEEGLQSS------ 164
           HT+IVA +GY+LWSWGRGRSGVLGNGK +DC+TPT+VLWPPL EDF +E  ++       
Sbjct: 393 HTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKV 452

Query: 165 -----EGVTETDEKLSSAANELELLKTKLSIMERYASVLHESLFGKPF 293
                E VTE ++KL  A  E++LL  KLSIMERYAS LH S+FGKPF
Sbjct: 453 EENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPF 500


>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 564

 Score =  135 bits (339), Expect = 5e-30
 Identities = 65/108 (60%), Positives = 80/108 (74%), Gaps = 11/108 (10%)
 Frame = +3

Query: 3   HTIIVAQEGYRLWSWGRGRSGVLGNGKVMDCYTPTIVLWPPLVEDFK--EEGLQSS---- 164
           HT++VA +GY+LWSWGRGRSGVLGNGK +DC+ P+ VLWPPL EDFK  E G  S     
Sbjct: 386 HTVLVADDGYKLWSWGRGRSGVLGNGKTVDCFAPSTVLWPPLTEDFKELESGTTSGEKKI 445

Query: 165 -----EGVTETDEKLSSAANELELLKTKLSIMERYASVLHESLFGKPF 293
                E VTE +++LS A  E++LL +KLS MERYAS+LH S+FGKPF
Sbjct: 446 ENKDPEEVTEMEKRLSLATEEMKLLHSKLSTMERYASILHGSIFGKPF 493


>ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 581

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/118 (55%), Positives = 80/118 (67%), Gaps = 21/118 (17%)
 Frame = +3

Query: 3   HTIIVAQEGYRLWSWGRGRSGVLGNGKVMDCYTPTIVLWPPLVEDFKEEGLQSS------ 164
           HT+IVA +GY+LWSWGRGRSGVLGNGK +DC+TPT+VLWPPL EDF +E  ++       
Sbjct: 393 HTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKV 452

Query: 165 ---------------EGVTETDEKLSSAANELELLKTKLSIMERYASVLHESLFGKPF 293
                          E VTE ++KL  A  E++LL  KLSIMERYAS LH S+FGKPF
Sbjct: 453 EENKTEEDKVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPF 510


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