BLASTX nr result

ID: Glycyrrhiza23_contig00029768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029768
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627845.1| Short internode related sequence [Medicago t...    83   2e-14
ref|XP_003546717.1| PREDICTED: uncharacterized protein LOC100790...    73   2e-11
ref|XP_003542825.1| PREDICTED: uncharacterized protein LOC100777...    70   1e-10
ref|XP_003539250.1| PREDICTED: uncharacterized protein LOC100805...    66   3e-09
ref|XP_003598516.1| Short internodes [Medicago truncatula] gi|35...    62   6e-08

>ref|XP_003627845.1| Short internode related sequence [Medicago truncatula]
           gi|355521867|gb|AET02321.1| Short internode related
           sequence [Medicago truncatula]
          Length = 327

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 55/101 (54%), Positives = 66/101 (65%), Gaps = 11/101 (10%)
 Frame = -3

Query: 270 ISADHHA---LPSSSALSVGLGIFPLLTTTMP---QPHHHNNNDAAPQDCGNTNPNYFWN 109
           IS+DH+    LPSSSALSVGLGIFPLLTTT P    P+++NNND   QD      + FWN
Sbjct: 27  ISSDHNPNLPLPSSSALSVGLGIFPLLTTTHPHHQNPNNNNNNDNIHQD------SNFWN 80

Query: 108 LKMCHQHQRNKGVMMIN-----VEEDEIEGSNKHLMMMGCE 1
           LKMC   Q    VMM+N     VEE++ +  NK+L MMGCE
Sbjct: 81  LKMCQPQQ----VMMMNSSRKRVEEEDDDVRNKNL-MMGCE 116


>ref|XP_003546717.1| PREDICTED: uncharacterized protein LOC100790311 [Glycine max]
          Length = 322

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/91 (51%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
 Frame = -3

Query: 270 ISADHHA---LPSSSALSVGLGIFPLLTTTMPQPHHHNNNDAAPQDCGNTNPNYFWNLKM 100
           ISA+HH+   LPS ++LSVGLGIFPLLT       H    D A  +  NTN NY WNLKM
Sbjct: 32  ISAEHHSNLPLPSQASLSVGLGIFPLLTVPHTNDVHAQVQDCANNNTNNTNTNY-WNLKM 90

Query: 99  CHQHQRN---KGVMMINVEEDEIEGSNKHLM 16
           C   + N   KGVM  N+E+   EGSNK +M
Sbjct: 91  CGPTEVNSTRKGVM--NMED---EGSNKQMM 116


>ref|XP_003542825.1| PREDICTED: uncharacterized protein LOC100777812 [Glycine max]
          Length = 319

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 47/94 (50%), Positives = 57/94 (60%), Gaps = 9/94 (9%)
 Frame = -3

Query: 270 ISADHHA---LPSSSALSVGLGIFPLLTTTMPQPHHHNNNDAAPQDCGNTNPN---YFWN 109
           ISA+HH+   LPS ++LSVGLGIFPLLT       H N+     QDC N N N    +WN
Sbjct: 28  ISAEHHSNLPLPSQASLSVGLGIFPLLTVP-----HTNDVQVQVQDCANNNNNTNTNYWN 82

Query: 108 LKMCHQHQRN---KGVMMINVEEDEIEGSNKHLM 16
           LKMC   + N   KGVM  N+E+   EGSNK +M
Sbjct: 83  LKMCGATEVNSTRKGVM--NMED---EGSNKQMM 111


>ref|XP_003539250.1| PREDICTED: uncharacterized protein LOC100805228 [Glycine max]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 9/78 (11%)
 Frame = -3

Query: 249 LPSSSA-LSVGLGIFPLLTTT--MPQPHHHNNNDAAPQDCGNTNPN---YFWNLKMCHQH 88
           LPSS+A LSVG GIFPLLT T  +PQ HHH++N+   +  G  N N    +WNLKMC Q 
Sbjct: 42  LPSSAASLSVGFGIFPLLTATPCVPQSHHHHHNNEVQELGGGANSNTTTNYWNLKMCQQE 101

Query: 87  QRN---KGVMMINVEEDE 43
             N   KGV+ +   +DE
Sbjct: 102 VNNPPKKGVINVADHDDE 119


>ref|XP_003598516.1| Short internodes [Medicago truncatula] gi|355487564|gb|AES68767.1|
           Short internodes [Medicago truncatula]
          Length = 329

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 15/95 (15%)
 Frame = -3

Query: 270 ISADH---HALPSSSALSVGLGIFPLLTTTMPQPHHHNNNDAAPQDCGNTNPNYFWNLKM 100
           IS DH   H+LPSS++LSVG GIFPLLT T   P   + N+   ++   +N N FWNL+M
Sbjct: 37  ISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEVQEN--PSNNNNFWNLRM 94

Query: 99  CHQ-----------HQRNKG-VMMINVEEDEIEGS 31
           C +            + N G + M+  EE+ + GS
Sbjct: 95  CPEVVNLPKKGVITEEENHGKIAMMESEENGVYGS 129


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