BLASTX nr result

ID: Glycyrrhiza23_contig00029731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029731
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515195.1| peptide chain release factor, putative [Rici...   148   2e-38
ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   147   5e-38
ref|XP_003626057.1| Peptide chain release factor [Medicago trunc...   147   3e-37
ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-li...   142   7e-37
ref|XP_004135356.1| PREDICTED: peptide chain release factor 1-li...   144   1e-36

>ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
           gi|223545675|gb|EEF47179.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 422

 Score =  148 bits (373), Expect(2) = 2e-38
 Identities = 71/82 (86%), Positives = 78/82 (95%)
 Frame = +2

Query: 2   IFKMYERYAHKNGWRFEVVDIAQSDLKGYKEASASIAGVGVFGKLKFESGIHRVQRVPVT 181
           IF+MYERY+ K GW+FEVVDI +SDLKGYKEASA+I+G GVFGKLKFESGIHRVQRVPVT
Sbjct: 193 IFRMYERYSQKKGWKFEVVDITESDLKGYKEASAAISGAGVFGKLKFESGIHRVQRVPVT 252

Query: 182 EKSGRVHTSAVSVAILPQADEM 247
           EKSGRVHTSAVSVAILPQADE+
Sbjct: 253 EKSGRVHTSAVSVAILPQADEV 274



 Score = 35.8 bits (81), Expect(2) = 2e-38
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1

Query: 244 DVQLKNEDLKIDTYRSG 294
           DVQL+NEDL+IDTYRSG
Sbjct: 275 DVQLRNEDLRIDTYRSG 291


>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|297744098|emb|CBI37068.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  147 bits (370), Expect(2) = 5e-38
 Identities = 70/82 (85%), Positives = 78/82 (95%)
 Frame = +2

Query: 2   IFKMYERYAHKNGWRFEVVDIAQSDLKGYKEASASIAGVGVFGKLKFESGIHRVQRVPVT 181
           IFKMYE+Y+ KNGW+FEVVDI +SDLKGYKEAS +I+G GV+GKLKFESGIHRVQRVPVT
Sbjct: 156 IFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAISGSGVYGKLKFESGIHRVQRVPVT 215

Query: 182 EKSGRVHTSAVSVAILPQADEM 247
           EKSGRVHTSAVSVAILPQADE+
Sbjct: 216 EKSGRVHTSAVSVAILPQADEV 237



 Score = 35.8 bits (81), Expect(2) = 5e-38
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1

Query: 244 DVQLKNEDLKIDTYRSG 294
           DVQL+NEDL+IDTYRSG
Sbjct: 238 DVQLRNEDLRIDTYRSG 254


>ref|XP_003626057.1| Peptide chain release factor [Medicago truncatula]
           gi|355501072|gb|AES82275.1| Peptide chain release factor
           [Medicago truncatula]
          Length = 526

 Score =  147 bits (370), Expect(2) = 3e-37
 Identities = 70/82 (85%), Positives = 78/82 (95%)
 Frame = +2

Query: 2   IFKMYERYAHKNGWRFEVVDIAQSDLKGYKEASASIAGVGVFGKLKFESGIHRVQRVPVT 181
           IFKMYE+YAH  GW+F+VVDIAQSD+KG+KEA+A+I GVGVFGKLKFESGIHRVQRVPVT
Sbjct: 251 IFKMYEKYAHNKGWKFDVVDIAQSDMKGFKEATAAILGVGVFGKLKFESGIHRVQRVPVT 310

Query: 182 EKSGRVHTSAVSVAILPQADEM 247
           EK GRVHTSAVSVAILPQADE+
Sbjct: 311 EKLGRVHTSAVSVAILPQADEV 332



 Score = 33.1 bits (74), Expect(2) = 3e-37
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +1

Query: 244 DVQLKNEDLKIDTYRSG 294
           DVQLK EDLKID YRSG
Sbjct: 333 DVQLKKEDLKIDFYRSG 349


>ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 415

 Score =  142 bits (357), Expect(2) = 7e-37
 Identities = 70/82 (85%), Positives = 77/82 (93%)
 Frame = +2

Query: 2   IFKMYERYAHKNGWRFEVVDIAQSDLKGYKEASASIAGVGVFGKLKFESGIHRVQRVPVT 181
           IF+MYE+YA + GW+FEVVDIAQSD KGYKEASA+IAG GVF KLKFESGIHRVQRVPVT
Sbjct: 186 IFRMYEKYALEKGWKFEVVDIAQSDHKGYKEASAAIAGDGVFRKLKFESGIHRVQRVPVT 245

Query: 182 EKSGRVHTSAVSVAILPQADEM 247
           EKSGR+HTSAVSVAILPQADE+
Sbjct: 246 EKSGRIHTSAVSVAILPQADEV 267



 Score = 37.0 bits (84), Expect(2) = 7e-37
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +1

Query: 244 DVQLKNEDLKIDTYRSG 294
           DVQLKNEDL+IDTYRSG
Sbjct: 268 DVQLKNEDLRIDTYRSG 284


>ref|XP_004135356.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
           gi|449503299|ref|XP_004161933.1| PREDICTED: peptide
           chain release factor 1-like [Cucumis sativus]
          Length = 426

 Score =  144 bits (363), Expect(2) = 1e-36
 Identities = 68/82 (82%), Positives = 77/82 (93%)
 Frame = +2

Query: 2   IFKMYERYAHKNGWRFEVVDIAQSDLKGYKEASASIAGVGVFGKLKFESGIHRVQRVPVT 181
           IFKMYERYA K GW+FEVVDI +SDLKGYKEA A+I+G GV+G+LKFESGIHRVQRVPVT
Sbjct: 195 IFKMYERYAQKKGWKFEVVDITESDLKGYKEAIAAISGAGVYGRLKFESGIHRVQRVPVT 254

Query: 182 EKSGRVHTSAVSVAILPQADEM 247
           EK+GRVHTSA+SVAILPQADE+
Sbjct: 255 EKAGRVHTSAISVAILPQADEV 276



 Score = 34.3 bits (77), Expect(2) = 1e-36
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +1

Query: 244 DVQLKNEDLKIDTYRSG 294
           DV+LKNEDL+IDT+RSG
Sbjct: 277 DVELKNEDLRIDTFRSG 293


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