BLASTX nr result

ID: Glycyrrhiza23_contig00029730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029730
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-li...   149   2e-34
ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   143   2e-32
emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]   143   2e-32
ref|XP_004135356.1| PREDICTED: peptide chain release factor 1-li...   140   1e-31

>ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 415

 Score =  149 bits (376), Expect = 2e-34
 Identities = 75/105 (71%), Positives = 80/105 (76%)
 Frame = -2

Query: 316 QHANTTNSAVRITHIPTGIVVAIQDDRSQHMNXXXXXXXXXXXLYEMEXXXXXXXXXXXR 137
           QHANTTNSAVR+THIPTGI++ IQD+RSQHMN           LYEME           R
Sbjct: 289 QHANTTNSAVRVTHIPTGIMITIQDERSQHMNKAKALKVLCAKLYEMERLRLRSSRSKLR 348

Query: 136 AAQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLD 2
             QIGSGDRSERIRTYNFPQGRVTDHRVGITYHS+DDVMQGENLD
Sbjct: 349 LEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSVDDVMQGENLD 393


>ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|222861718|gb|EEE99260.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/105 (70%), Positives = 81/105 (77%)
 Frame = -2

Query: 316 QHANTTNSAVRITHIPTGIVVAIQDDRSQHMNXXXXXXXXXXXLYEMEXXXXXXXXXXXR 137
           QHANTTNSAVRITH+PTGI V+IQD+RSQHMN           LYEME           R
Sbjct: 232 QHANTTNSAVRITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSRLHMSRSRLR 291

Query: 136 AAQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLD 2
           + QIGSGDRSERIRTYNFPQGRVTDHRVGIT+HSI+DVMQGE+LD
Sbjct: 292 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSINDVMQGESLD 336


>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|297744098|emb|CBI37068.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  143 bits (360), Expect = 2e-32
 Identities = 73/105 (69%), Positives = 80/105 (76%)
 Frame = -2

Query: 316 QHANTTNSAVRITHIPTGIVVAIQDDRSQHMNXXXXXXXXXXXLYEMEXXXXXXXXXXXR 137
           QHANTTNSAVRITHIP+G+ VAIQD+RSQHMN           LYE+E           R
Sbjct: 259 QHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLR 318

Query: 136 AAQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLD 2
             QIGSGDRSERIRTYNFPQGRVTDHRVGIT+HS++DVMQGENLD
Sbjct: 319 MEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLD 363


>emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score =  143 bits (360), Expect = 2e-32
 Identities = 73/105 (69%), Positives = 80/105 (76%)
 Frame = -2

Query: 316  QHANTTNSAVRITHIPTGIVVAIQDDRSQHMNXXXXXXXXXXXLYEMEXXXXXXXXXXXR 137
            QHANTTNSAVRITHIP+G+ VAIQD+RSQHMN           LYE+E           R
Sbjct: 1416 QHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLR 1475

Query: 136  AAQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLD 2
              QIGSGDRSERIRTYNFPQGRVTDHRVGIT+HS++DVMQGENLD
Sbjct: 1476 MEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLD 1520


>ref|XP_004135356.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
           gi|449503299|ref|XP_004161933.1| PREDICTED: peptide
           chain release factor 1-like [Cucumis sativus]
          Length = 426

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/105 (67%), Positives = 78/105 (74%)
 Frame = -2

Query: 316 QHANTTNSAVRITHIPTGIVVAIQDDRSQHMNXXXXXXXXXXXLYEMEXXXXXXXXXXXR 137
           QHANTTNSAVR+ H+PTG+ V IQD+RSQHMN           LYEME           R
Sbjct: 298 QHANTTNSAVRVIHVPTGLTVTIQDERSQHMNKAKALKLICAKLYEMERRRIQSSRSKLR 357

Query: 136 AAQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLD 2
           + QIGSGDRSERIRTYNFPQGRVTDHRVGIT HSI++VMQGENLD
Sbjct: 358 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITDHSIEEVMQGENLD 402