BLASTX nr result

ID: Glycyrrhiza23_contig00029727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029727
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    75   5e-12
gb|ABN08573.1| Ribonuclease H [Medicago truncatula]                    75   7e-12
gb|AFK48593.1| unknown [Lotus japonicus]                               70   2e-10
gb|ABD32401.2| Ribonuclease H [Medicago truncatula]                    67   1e-09
ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]...    66   3e-09

>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/73 (47%), Positives = 52/73 (71%)
 Frame = +3

Query: 27  GLQLAREMGIQHVRCYSDSLTALELVSKGGGELHHYASLIRTVRELVKLDWSVELVHTLR 206
           GL+L  ++GI+HV C+SDS T ++LV K     H Y +LI  +++L++ DW V L HTL 
Sbjct: 130 GLKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAIKKLLRRDWVVSLRHTLC 189

Query: 207 EGNSSANFMAKMG 245
           EGN++A+F+AK G
Sbjct: 190 EGNAAADFLAKKG 202


>gb|ABN08573.1| Ribonuclease H [Medicago truncatula]
          Length = 147

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/73 (46%), Positives = 51/73 (69%)
 Frame = +3

Query: 27  GLQLAREMGIQHVRCYSDSLTALELVSKGGGELHHYASLIRTVRELVKLDWSVELVHTLR 206
           GL LAR  G  ++ CYSDS   +++++K   + H YAS I  + +L+ L+W V+L H+LR
Sbjct: 30  GLHLARNFGCTYIICYSDSKGGIDILAKPVKKYHCYASAIANIIDLMNLEWEVKLCHSLR 89

Query: 207 EGNSSANFMAKMG 245
           EGN+SA+F+AK G
Sbjct: 90  EGNASADFLAKWG 102


>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/75 (46%), Positives = 45/75 (60%)
 Frame = +3

Query: 27  GLQLAREMGIQHVRCYSDSLTALELVSKGGGELHHYASLIRTVRELVKLDWSVELVHTLR 206
           GL LA E G + V C SDS  A+ LV       H YA+L+  +++L   DW VEL HTLR
Sbjct: 167 GLSLAWEQGYRIVECQSDSQDAVTLVKSTPSSCHRYAALVWDIKDLQSRDWIVELRHTLR 226

Query: 207 EGNSSANFMAKMGVD 251
           EGN+ A+ + K G D
Sbjct: 227 EGNACADLLVKHGAD 241


>gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
          Length = 233

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/75 (41%), Positives = 49/75 (65%)
 Frame = +3

Query: 27  GLQLAREMGIQHVRCYSDSLTALELVSKGGGELHHYASLIRTVRELVKLDWSVELVHTLR 206
           GL+L  ++ +  + CYSDSL A+ L++      H YA+LI+ +++L+  D ++ L HTLR
Sbjct: 129 GLKLVTDLNVNEIMCYSDSLLAVNLIANDTPRYHIYAALIQNIKDLLN-DRNISLHHTLR 187

Query: 207 EGNSSANFMAKMGVD 251
           EGN  A+F AK G +
Sbjct: 188 EGNQCADFFAKFGAN 202


>ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
            gi|355495128|gb|AES76331.1| Resistance protein PRG
            [Medicago truncatula]
          Length = 1256

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/79 (41%), Positives = 50/79 (63%)
 Frame = +3

Query: 27   GLQLAREMGIQHVRCYSDSLTALELVSKGGGELHHYASLIRTVRELVKLDWSVELVHTLR 206
            GL LA  MGI+ + C+SDS  A+ L++      H YA LI+ ++E++  + +  ++HTLR
Sbjct: 1152 GLTLAASMGIEELACFSDSQIAISLITAAIPRFHAYAVLIQDIKEILASN-NFTILHTLR 1210

Query: 207  EGNSSANFMAKMGVDLLRE 263
            EGN  A+FMAK+G     E
Sbjct: 1211 EGNHCADFMAKLGASSTEE 1229


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