BLASTX nr result

ID: Glycyrrhiza23_contig00029721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029721
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like...   125   3e-27
ref|XP_003590054.1| RING finger protein [Medicago truncatula] gi...   125   4e-27
ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like...   124   6e-27
ref|XP_003555162.1| PREDICTED: RING-H2 finger protein ATL1-like ...   115   3e-24
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...   108   3e-22

>ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 367

 Score =  125 bits (315), Expect = 3e-27
 Identities = 68/125 (54%), Positives = 90/125 (72%), Gaps = 9/125 (7%)
 Frame = +1

Query: 52  MDFVSRRHLIHVSRESCVSQALSPITSTHPDI---SVHPSVTNFPIIAILVVGMMATSFM 222
           MD VSRR+LI+VS+     QALSPITS    I     H S T+FPIIAI ++G+MAT+F+
Sbjct: 1   MDLVSRRYLIYVSQHGSQPQALSPITSPGSSIFHPHQHASSTSFPIIAIAIIGIMATAFL 60

Query: 223 LMAYYIFVIKCCLNWNRVDTVRVRRFSLSRQYEE------PSSEHRGLDEAVIQSIPVIH 384
           L++YYIFVIKCCLNW+R+D   +RRFS SR+ E+      P+++ RGLDEA+I+ IPV  
Sbjct: 61  LVSYYIFVIKCCLNWHRIDV--LRRFSPSRRREDPPPTYSPATDTRGLDEALIRLIPVTQ 118

Query: 385 YKMSE 399
           YK  +
Sbjct: 119 YKAQQ 123


>ref|XP_003590054.1| RING finger protein [Medicago truncatula]
           gi|355479102|gb|AES60305.1| RING finger protein
           [Medicago truncatula]
          Length = 321

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/126 (52%), Positives = 87/126 (69%), Gaps = 7/126 (5%)
 Frame = +1

Query: 52  MDFVSRRHLIHVSRESCVSQALSPITSTHPDI-SVHPSVTNFPIIAILVVGMMATSFMLM 228
           M+FV+++H +           + P++  HP I + H S TNFPI+ I+VVGMM TSF+LM
Sbjct: 1   MNFVNKQHHL----------IIYPVSQAHPPIQNHHDSSTNFPIV-IIVVGMMVTSFLLM 49

Query: 229 AYYIFVIKCCLNWNRVDTVRVRRFSLSRQYEEPS------SEHRGLDEAVIQSIPVIHYK 390
           AYY FVIKCC NWN +D  R RRFS SRQ+EE S      S+HRGL+++VI SIPVIHYK
Sbjct: 50  AYYTFVIKCCFNWNNIDLDRGRRFSFSRQHEEQSTSYSMTSDHRGLEQSVINSIPVIHYK 109

Query: 391 MSEEEG 408
           + ++ G
Sbjct: 110 LEKDYG 115


>ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 364

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 9/122 (7%)
 Frame = +1

Query: 52  MDFVSRRHLIHVSRESCVSQALSPITSTHPDI---SVHPSVTNFPIIAILVVGMMATSFM 222
           MD VSRR+LI+ S+     QALSPITS    I     H S T+FPIIAI ++G+MAT+F+
Sbjct: 1   MDLVSRRYLIYASQHGPQPQALSPITSPGSSIFHPHQHSSSTSFPIIAIAIIGIMATAFL 60

Query: 223 LMAYYIFVIKCCLNWNRVDTVRVRRFSLSRQYEE------PSSEHRGLDEAVIQSIPVIH 384
           L++YYIFVIKCCLNW+R+D   +RRFS SR+ E+      P ++ RGLDEA+I+ IPVI 
Sbjct: 61  LVSYYIFVIKCCLNWHRIDV--LRRFSPSRRREDPPPTYSPGTDTRGLDEALIRLIPVIQ 118

Query: 385 YK 390
           YK
Sbjct: 119 YK 120


>ref|XP_003555162.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 352

 Score =  115 bits (289), Expect = 3e-24
 Identities = 65/124 (52%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
 Frame = +1

Query: 52  MDFVSRRHLIHVSRESCVSQALSPITSTHPDISVHPSVTNFPIIAILVVGMMATSFMLMA 231
           MDFVS+RHL+H      + QA SP T+   D++ +PS  N+  + ILV+GMM T+F L+ 
Sbjct: 1   MDFVSQRHLLH-----SMQQAHSPCTTPLSDVT-NPSPYNYSFLVILVIGMMFTAFFLIG 54

Query: 232 YYIFVIKCCLNWNRVDTVRVRRFSLSRQYEEPS------SEHRGLDEAVIQSIPVIHYKM 393
           YYI V+KCCLNW  VD VR+  FSLSR +E+PS      SE RGL+EAVI+ IPVI +K 
Sbjct: 55  YYILVVKCCLNWPHVDHVRI--FSLSRSHEDPSAPYSTASEPRGLEEAVIKLIPVIQFKP 112

Query: 394 SEEE 405
            E E
Sbjct: 113 EEGE 116


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score =  108 bits (271), Expect = 3e-22
 Identities = 62/126 (49%), Positives = 82/126 (65%), Gaps = 9/126 (7%)
 Frame = +1

Query: 40  IESIMDFVSRRHLIHVSRESCVSQALSPITSTHPDI---SVHPSVTNFPIIAILVVGMMA 210
           I S+MD VS    IH S      QA SPI S    +     H S T+FPIIAI V+G++A
Sbjct: 4   IASLMDLVSTDSSIHGS------QAFSPIKSQASSVLPSPSHSSDTSFPIIAIAVIGILA 57

Query: 211 TSFMLMAYYIFVIKCCLNWNRVDTVRVRRFSLSRQYEE------PSSEHRGLDEAVIQSI 372
           T+F+L++YYIFVIKCCLNW+R+D +R   FS SR  E+      P+ E RGLDE+VI+SI
Sbjct: 58  TAFLLVSYYIFVIKCCLNWHRIDLLRRFSFSRSRHPEDPLMVYSPAIESRGLDESVIRSI 117

Query: 373 PVIHYK 390
           P+  ++
Sbjct: 118 PIFQFR 123


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