BLASTX nr result

ID: Glycyrrhiza23_contig00029717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029717
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541823.1| PREDICTED: uncharacterized protein LOC100797...   120   9e-26
ref|XP_002300416.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
emb|CBI20220.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002531359.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|NP_001234265.1| uncharacterized protein LOC100505457 [Solanu...    59   4e-07

>ref|XP_003541823.1| PREDICTED: uncharacterized protein LOC100797471 [Glycine max]
          Length = 415

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/96 (60%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3   KLWNSHEFEFDLEKDNFGVEPGLPFLASLPFESNPIWPLPNILQKTPQY--HHRSSSPMV 176
           K W+S  F+FD EK+NFGVE G P L S+PFES+PIWPLPN++Q+TPQY   H++SSPM 
Sbjct: 151 KWWSS--FQFDSEKNNFGVELGSPILPSVPFESSPIWPLPNLVQRTPQYQHQHQTSSPMA 208

Query: 177 NTSSGTSSVHVPHLSIEPPSNQNYSNSGVSVRPVEK 284
           + SSGT S ++PH +IEPPSNQN + S V V+ +EK
Sbjct: 209 SVSSGTLSTYMPHFTIEPPSNQNNNCSSVPVKSMEK 244


>ref|XP_002300416.1| predicted protein [Populus trichocarpa] gi|222847674|gb|EEE85221.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/94 (48%), Positives = 67/94 (71%), Gaps = 5/94 (5%)
 Frame = +3

Query: 3   KLWNSHEFEFDLEKDNFGVEPGLPFLASL--PFESNPIWPLPNILQKTPQYHHRSSS--- 167
           K+WNS ++  +LEK+N GV+P L F ++L  P+ESNPIWPLP+++Q+  Q+   SSS   
Sbjct: 143 KMWNSSDY--NLEKENCGVDPALAFRSNLNLPYESNPIWPLPSLMQRAQQHGQHSSSSSC 200

Query: 168 PMVNTSSGTSSVHVPHLSIEPPSNQNYSNSGVSV 269
            MVN SSG+SS  + +  +EPPSNQ+Y ++ V V
Sbjct: 201 SMVNASSGSSSSSLQNPQMEPPSNQSYYDNYVPV 234


>emb|CBI20220.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   KLWNSHEFEFDLEKDNFGVEPGLPFLASLPFESNPIWPLPNILQKTPQYHHRSSSPMVNT 182
           KLWN    E +LE +N  V+ GL F    P+ESNPIWPLP ++Q+   Y   SSS MVN 
Sbjct: 129 KLWNH---ELNLEGENPRVDHGLVFQP--PYESNPIWPLPTLMQRAQPYQQPSSS-MVNV 182

Query: 183 SSGTSSVHVPHLSIEPPSNQN-YSNSGVSVRPVEK 284
           SSGTSS  +P+  IEPPSNQ+ Y N+  S+ P E+
Sbjct: 183 SSGTSSSPIPNFQIEPPSNQSYYGNNYTSMWPEEE 217


>ref|XP_002531359.1| conserved hypothetical protein [Ricinus communis]
           gi|223529040|gb|EEF31027.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 425

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3   KLWNSHEFEFDLEKDNFGVEPGLPFLAS--LPFESNPIWPLPNILQKTPQYHHRSSSPMV 176
           K+WNS   +++LE +N GV+P L F +S  LP+ESNPIWPL +++++T QY     S +V
Sbjct: 160 KIWNSSSDQYNLENENHGVDPRLAFRSSLNLPYESNPIWPLQSLIERT-QYQPPPPS-LV 217

Query: 177 NTSSGTSSVHVPHLSIEPPSNQNYSNSGVSVRPVEK 284
           N SS  ++  + +L +E PSNQNY  +   + P E+
Sbjct: 218 NASSINTAASLLNLHMELPSNQNYYGNYTPIWPEEE 253


>ref|NP_001234265.1| uncharacterized protein LOC100505457 [Solanum lycopersicum]
           gi|304367604|gb|ADM26616.1| hypothetical protein
           [Solanum lycopersicum]
          Length = 451

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
 Frame = +3

Query: 3   KLWNSHEFEFDLEKDNF-GVEPGLPFLAS--LPFE-SNPIWPLPNILQKTPQYHHRS-SS 167
           KLW+    E+  E+++  G   G+ F A+  LP E  NPI PLP++LQ++ QY   S SS
Sbjct: 179 KLWSC---EYSPERESKQGNRHGVVFGANVDLPNELHNPILPLPSVLQRSQQYQQPSCSS 235

Query: 168 PMVNTSSGTSSVHVPHLSIEPPSNQNY 248
            M+N SSG SS  V +  +EPPSNQNY
Sbjct: 236 SMMNISSGISSSSVLNYQMEPPSNQNY 262


Top