BLASTX nr result

ID: Glycyrrhiza23_contig00029703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029703
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...   193   1e-47
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   186   1e-45
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   182   2e-44
ref|XP_002313369.1| chromatin remodeling complex subunit [Populu...   178   4e-43
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   176   2e-42

>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 2083

 Score =  193 bits (490), Expect = 1e-47
 Identities = 88/103 (85%), Positives = 99/103 (96%)
 Frame = -2

Query: 310 EKVLWHQPKGMAAEAQRHNRSTEPILMSHLFDSVPDWDDMEFLIKWKSQSHLHCQWKSFV 131
           EKVLWHQPKGMAAEAQR+N+S EP+LMSHLFDS PDW++MEFLIKWK QSHLHCQWKSFV
Sbjct: 398 EKVLWHQPKGMAAEAQRNNQSMEPVLMSHLFDSEPDWNNMEFLIKWKGQSHLHCQWKSFV 457

Query: 130 ELQNVSGFKKVLNYTKKVTEDIRHRMAISREEIEINDVSKEMD 2
           +LQN+SGFKKVLNYTK+VTE+IR+RM ISREEIE+NDVSKEMD
Sbjct: 458 DLQNLSGFKKVLNYTKRVTEEIRNRMGISREEIEVNDVSKEMD 500


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score =  186 bits (473), Expect = 1e-45
 Identities = 85/103 (82%), Positives = 95/103 (92%)
 Frame = -2

Query: 310 EKVLWHQPKGMAAEAQRHNRSTEPILMSHLFDSVPDWDDMEFLIKWKSQSHLHCQWKSFV 131
           EKVLWHQPKGMA +AQR+NRSTEP+LMSHLFDS  DW+++EFLIKWK QSHLHCQWKSF 
Sbjct: 433 EKVLWHQPKGMAEDAQRNNRSTEPVLMSHLFDSEIDWNEIEFLIKWKGQSHLHCQWKSFA 492

Query: 130 ELQNVSGFKKVLNYTKKVTEDIRHRMAISREEIEINDVSKEMD 2
           ELQN+SGFKKVLNYTKK+ EDIR+R  ISREEIE+NDVSKEMD
Sbjct: 493 ELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSKEMD 535


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1764

 Score =  182 bits (463), Expect = 2e-44
 Identities = 83/103 (80%), Positives = 94/103 (91%)
 Frame = -2

Query: 310 EKVLWHQPKGMAAEAQRHNRSTEPILMSHLFDSVPDWDDMEFLIKWKSQSHLHCQWKSFV 131
           EKVLWHQPKGMA +AQR+NRSTEP+L+SHLFDS  DW+++EFLIKWK QSHLHC WKSF 
Sbjct: 430 EKVLWHQPKGMAEDAQRNNRSTEPVLLSHLFDSEIDWNEIEFLIKWKGQSHLHCLWKSFA 489

Query: 130 ELQNVSGFKKVLNYTKKVTEDIRHRMAISREEIEINDVSKEMD 2
           ELQN+SGFKKVLNYTKK+ EDIR+R  ISREEIE+NDVSKEMD
Sbjct: 490 ELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSKEMD 532


>ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222849777|gb|EEE87324.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1748

 Score =  178 bits (452), Expect = 4e-43
 Identities = 78/103 (75%), Positives = 94/103 (91%)
 Frame = -2

Query: 310 EKVLWHQPKGMAAEAQRHNRSTEPILMSHLFDSVPDWDDMEFLIKWKSQSHLHCQWKSFV 131
           E+VLWHQP+G A +A R+NRSTEP+L+S+LFDSVPDW +MEFLIKWK QSH+HCQWKSF 
Sbjct: 417 ERVLWHQPRGTAEDAMRNNRSTEPVLLSYLFDSVPDWKEMEFLIKWKGQSHMHCQWKSFS 476

Query: 130 ELQNVSGFKKVLNYTKKVTEDIRHRMAISREEIEINDVSKEMD 2
           +LQN+SGFKKVLNYTKKV ED+R+R + +REEIE+NDVSKEMD
Sbjct: 477 DLQNLSGFKKVLNYTKKVMEDVRYRRSFTREEIEVNDVSKEMD 519


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/103 (79%), Positives = 92/103 (89%)
 Frame = -2

Query: 310 EKVLWHQPKGMAAEAQRHNRSTEPILMSHLFDSVPDWDDMEFLIKWKSQSHLHCQWKSFV 131
           EKVLWHQ KG A +AQ +NRSTEP+LMSHLFDS  DW+++EFLIKWK QSHLHCQWKSF 
Sbjct: 415 EKVLWHQLKGTAEDAQSNNRSTEPVLMSHLFDSEFDWNEIEFLIKWKGQSHLHCQWKSFA 474

Query: 130 ELQNVSGFKKVLNYTKKVTEDIRHRMAISREEIEINDVSKEMD 2
           ELQN+SGFKKVLNYTKK+ EDIR+R AISREEIE+ DVSKEMD
Sbjct: 475 ELQNLSGFKKVLNYTKKIMEDIRYRRAISREEIEVYDVSKEMD 517


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