BLASTX nr result

ID: Glycyrrhiza23_contig00029702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029702
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containin...   130   1e-28
ref|XP_003528432.1| PREDICTED: katanin p80 WD40 repeat-containin...   129   3e-28
ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containin...   127   1e-27
ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containin...   124   1e-26
ref|XP_003593480.1| Katanin p80 WD40-containing subunit B1 [Medi...   116   2e-24

>ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 814

 Score =  130 bits (326), Expect = 1e-28
 Identities = 68/85 (80%), Positives = 70/85 (82%)
 Frame = +3

Query: 3   SKIERHVKVSLDMLLKLVAVFGPTIRSTISAPPSVRVDLHAEQRRECCNQCFMQLQKIQM 182
           S IERHVKVSLDMLLKLVAVFGPTIRSTISAPPSV +DLHAEQRREC NQCFMQLQKI+M
Sbjct: 729 SNIERHVKVSLDMLLKLVAVFGPTIRSTISAPPSVGIDLHAEQRRECSNQCFMQLQKIRM 788

Query: 183 XXXXXXXXXXXXAKSAQELNLVLQQ 257
                       AKSAQELNLVLQQ
Sbjct: 789 ILPILIRRGGILAKSAQELNLVLQQ 813


>ref|XP_003528432.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 712

 Score =  129 bits (323), Expect = 3e-28
 Identities = 67/85 (78%), Positives = 70/85 (82%)
 Frame = +3

Query: 3   SKIERHVKVSLDMLLKLVAVFGPTIRSTISAPPSVRVDLHAEQRRECCNQCFMQLQKIQM 182
           S IERHVKVSLDMLLKLVAVFGPT+RSTISAPPSV VDLHAEQRREC NQCFMQLQKI++
Sbjct: 627 SNIERHVKVSLDMLLKLVAVFGPTVRSTISAPPSVGVDLHAEQRRECSNQCFMQLQKIRL 686

Query: 183 XXXXXXXXXXXXAKSAQELNLVLQQ 257
                       AKSAQELNLVLQQ
Sbjct: 687 ILPILIRRGGLLAKSAQELNLVLQQ 711


>ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 825

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/86 (74%), Positives = 71/86 (82%)
 Frame = +3

Query: 3   SKIERHVKVSLDMLLKLVAVFGPTIRSTISAPPSVRVDLHAEQRRECCNQCFMQLQKIQM 182
           SKIERHVK+SLDMLLKLVAVFGPTIR+T+SAPPSV VDLH E+RRECCN+CFM+LQKIQM
Sbjct: 740 SKIERHVKLSLDMLLKLVAVFGPTIRATVSAPPSVGVDLHQEERRECCNKCFMELQKIQM 799

Query: 183 XXXXXXXXXXXXAKSAQELNLVLQQS 260
                       A+SA ELNLVLQQS
Sbjct: 800 TLPILIRKGGILARSALELNLVLQQS 825


>ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 824

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/86 (72%), Positives = 70/86 (81%)
 Frame = +3

Query: 3   SKIERHVKVSLDMLLKLVAVFGPTIRSTISAPPSVRVDLHAEQRRECCNQCFMQLQKIQM 182
           SKIERHVKVSLDMLLK+VAVFGPT+ +T+SAPPSV VDLH E+RRECCN+CFM+LQKIQM
Sbjct: 739 SKIERHVKVSLDMLLKVVAVFGPTVLATVSAPPSVGVDLHQEERRECCNKCFMELQKIQM 798

Query: 183 XXXXXXXXXXXXAKSAQELNLVLQQS 260
                       A+SA ELNLVLQQS
Sbjct: 799 TLPILIRKGGILARSALELNLVLQQS 824


>ref|XP_003593480.1| Katanin p80 WD40-containing subunit B1 [Medicago truncatula]
            gi|355482528|gb|AES63731.1| Katanin p80 WD40-containing
            subunit B1 [Medicago truncatula]
          Length = 1131

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/86 (68%), Positives = 65/86 (75%)
 Frame = +3

Query: 3    SKIERHVKVSLDMLLKLVAVFGPTIRSTISAPPSVRVDLHAEQRRECCNQCFMQLQKIQM 182
            SK ERHVKVSLDMLLK  AVFG TI +TISAPPSV VDLH EQRRECCN+CFM+LQK+Q 
Sbjct: 1046 SKTERHVKVSLDMLLKFAAVFGSTITATISAPPSVGVDLHREQRRECCNECFMELQKVQT 1105

Query: 183  XXXXXXXXXXXXAKSAQELNLVLQQS 260
                        AKS+ ELNLVLQ+S
Sbjct: 1106 ILPMLIRRGGLLAKSSMELNLVLQRS 1131


Top