BLASTX nr result

ID: Glycyrrhiza23_contig00029681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029681
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                               75   6e-17
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...    69   8e-17
ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782...    71   1e-16
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    72   1e-16
emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                 67   2e-16

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 74.7 bits (182), Expect(2) = 6e-17
 Identities = 29/68 (42%), Positives = 51/68 (75%)
 Frame = -1

Query: 302  FNLQQGLLYFRQRLFIPLETNLRSILIEEHHATPAGGHSGIKGTLTRLASSFSWPHMAKD 123
            + +++GLLY++ R+ IP E  + + +++E+H++P GGH+GI  TL RL + F WP M +D
Sbjct: 1049 YTVREGLLYWKDRVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQFYWPKMQED 1108

Query: 122  VKSFIREC 99
            VK++I++C
Sbjct: 1109 VKAYIQKC 1116



 Score = 37.4 bits (85), Expect(2) = 6e-17
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = -3

Query: 93   LPSVQGKTVIWVVVDRLSKYAHFIALPTHFS 1
            LP+  G +VI VV+DRL+KYAHFI L   ++
Sbjct: 1154 LPNSFGLSVIMVVIDRLTKYAHFIPLKADYN 1184


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score = 69.3 bits (168), Expect(2) = 8e-17
 Identities = 31/84 (36%), Positives = 51/84 (60%)
 Frame = -1

Query: 344  LLSKFRSTEGQSQLFNLQQGLLYFRQRLFIPLETNLRSILIEEHHATPAGGHSGIKGTLT 165
            +LS   +     + + L+ GLL ++ R+++   T +R +L+E +HA+  GGHSGI+ T  
Sbjct: 1155 ILSLIETDGDPERHYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYH 1214

Query: 164  RLASSFSWPHMAKDVKSFIRECTT 93
            R+   F WP + K V+ +IREC T
Sbjct: 1215 RIKQLFYWPGLKKQVEHYIRECPT 1238



 Score = 42.4 bits (98), Expect(2) = 8e-17
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = -3

Query: 93   LPSVQGKTVIWVVVDRLSKYAHFIAL 16
            LP  QGK VI VVVDRL+KYAHF+AL
Sbjct: 1274 LPKSQGKDVILVVVDRLTKYAHFLAL 1299


>ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
          Length = 1863

 Score = 70.9 bits (172), Expect(2) = 1e-16
 Identities = 35/88 (39%), Positives = 51/88 (57%)
 Frame = -1

Query: 341  LSKFRSTEGQSQLFNLQQGLLYFRQRLFIPLETNLRSILIEEHHATPAGGHSGIKGTLTR 162
            L    S   Q + F L   L++F+  ++I  +      L+ E+HATP GGH G+K TL R
Sbjct: 956  LEAIHSHPDQHRDFTLSNDLIFFKGAIWINPQNPFIPSLLHEYHATPIGGHFGVKKTLHR 1015

Query: 161  LASSFSWPHMAKDVKSFIRECTTFPRFK 78
            L S+F W  M+ DVK+FIR+C+   + K
Sbjct: 1016 LRSNFHWSSMSNDVKAFIRKCSICQQVK 1043



 Score = 40.0 bits (92), Expect(2) = 1e-16
 Identities = 21/32 (65%), Positives = 22/32 (68%)
 Frame = -3

Query: 96   YLPSVQGKTVIWVVVDRLSKYAHFIALPTHFS 1
            +LPS  G TVI VVVDR SK  H  ALPT FS
Sbjct: 1073 HLPSSHGFTVILVVVDRFSKGVHLGALPTQFS 1104


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 72.0 bits (175), Expect(2) = 1e-16
 Identities = 36/91 (39%), Positives = 53/91 (58%)
 Frame = -1

Query: 350  QALLSKFRSTEGQSQLFNLQQGLLYFRQRLFIPLETNLRSILIEEHHATPAGGHSGIKGT 171
            Q L+++  +     Q F ++ GLL +  RL IP    L + L+EE+H++P GGHSGI  T
Sbjct: 1065 QHLMAEVTAGRTPLQGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGGHSGIFKT 1124

Query: 170  LTRLASSFSWPHMAKDVKSFIRECTTFPRFK 78
              RLA  + W  M KDV +F++ C    +FK
Sbjct: 1125 YKRLAGEWYWKGMKKDVTTFVQNCQICQQFK 1155



 Score = 38.9 bits (89), Expect(2) = 1e-16
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = -3

Query: 93   LPSVQGKTVIWVVVDRLSKYAHFIALPTHFS 1
            LP  QG   I VVVDRLSKYAHFI L   F+
Sbjct: 1186 LPKSQGWDTILVVVDRLSKYAHFITLKHPFT 1216


>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 66.6 bits (161), Expect(2) = 2e-16
 Identities = 32/91 (35%), Positives = 55/91 (60%)
 Frame = -1

Query: 350  QALLSKFRSTEGQSQLFNLQQGLLYFRQRLFIPLETNLRSILIEEHHATPAGGHSGIKGT 171
            Q L+S+  +       +++  G L+ + RL IP  + +R++++E  H++  GGHSGI+ T
Sbjct: 1039 QQLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRAT 1098

Query: 170  LTRLASSFSWPHMAKDVKSFIRECTTFPRFK 78
            + R+ S F W  ++KDV  FI++C T  R K
Sbjct: 1099 VVRIKSLFFWKGLSKDVADFIQKCETCLRCK 1129



 Score = 43.9 bits (102), Expect(2) = 2e-16
 Identities = 21/29 (72%), Positives = 22/29 (75%)
 Frame = -3

Query: 93   LPSVQGKTVIWVVVDRLSKYAHFIALPTH 7
            LP   GK  IWVV+DRLSKYAHFI L TH
Sbjct: 1160 LPKSHGKDAIWVVIDRLSKYAHFIPL-TH 1187


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